D. rerio Gene: atxn7l2a - ENSDARG00000055300 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055300
Nameatxn7l2a
Descriptionataxin 7-like 2a [Source:ZFIN;Acc:ZDB-GENE-060519-13]
OrganismDanio rerio (zebrafish)
Synonym(s)fi32b11, wu:fi32b11, zgc:136546

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.46e3
  • 1.46e3
  • 1.48e3
  • 3.77e3
  • 3.90e3
  • 4.95e3
95.12
  • 95.12
  • 95.03
  • 87.39
  • 86.96
  • 83.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
  • 1.50e4
94.54
  • 94.54
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.29e3
  • 3.29e3
  • 4.37e3
  • 4.99e3
  • 5.13e3
  • 5.62e3
  • 5.69e3
88.99
  • 88.99
  • 85.37
  • 83.31
  • 82.83
  • 81.18
  • 80.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.31e3
  • 3.31e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.24
  • 88.24
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.21e3
  • 4.21e3
  • 4.70e3
  • 4.83e3
  • 5.75e3
  • 6.10e3
  • 6.84e3
  • 7.65e3
  • 7.93e3
  • 8.01e3
  • 8.15e3
  • 8.51e3
  • 9.14e3
  • 9.75e3
  • 1.15e4
  • 1.41e4
  • 1.50e4
85.91
  • 85.91
  • 84.25
  • 83.84
  • 80.76
  • 79.57
  • 77.10
  • 74.38
  • 73.44
  • 73.18
  • 72.72
  • 71.49
  • 69.39
  • 67.35
  • 61.47
  • 52.87
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.83
  • 82.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.78
  • 81.78
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.57e3
  • 5.57e3
  • 5.95e3
  • 7.11e3
  • 1.01e4
81.34
  • 81.34
  • 80.09
  • 76.20
  • 66.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.03e3
  • 6.03e3
79.83
  • 79.83
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.56e3
  • 6.56e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.92e3
  • 6.92e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.14e3
  • 7.14e3
76.09
  • 76.09
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
  • 1.20e4
75.83
  • 75.83
  • 59.91
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.55
  • 75.55
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
7.41e3
  • 7.41e3
  • 8.03e3
  • 8.20e3
  • 8.37e3
  • 8.64e3
  • 8.95e3
  • 9.06e3
  • 9.23e3
  • 9.97e3
  • 1.27e4
75.21
  • 75.21
  • 73.11
  • 72.54
  • 71.99
  • 71.07
  • 70.02
  • 69.67
  • 69.11
  • 66.60
  • 57.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.87
  • 74.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
  • 1.72e4
72.84
  • 72.84
  • 42.35
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.56e3
  • 8.56e3
71.35
  • 71.35
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.31e3
  • 9.31e3
  • 1.04e4
68.82
  • 68.82
  • 65.25
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.00e4
  • 1.00e4
  • 1.13e4
  • 1.32e4
66.49
  • 66.49
  • 62.30
  • 55.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.16e4
62.94
  • 62.94
  • 61.07
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.65
  • 62.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.70
  • 59.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.94
  • 56.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.23
  • 55.23
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.95
  • 51.95
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.80
  • 50.80
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.60
  • 42.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX248230
EnsemblENSDARG00000055300 (atxn7l2a)
Uniprot/SPTREMBLE7F2J0, E7F2J0_DANRE, F1QDM1, F1QDM1_DANRE
ZFINZDB-GENE-060519-13 (atxn7l2a)

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