D. rerio Gene: leo1 - ENSDARG00000055357 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055357
Nameleo1
DescriptionLEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77374
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
996
  • 996
  • 2.35e3
  • 4.49e3
  • 7.76e3
96.67
  • 96.67
  • 92.14
  • 84.96
  • 74.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.15e3
  • 1.15e3
  • 1.40e3
  • 1.41e3
  • 1.58e3
  • 2.06e3
  • 2.69e3
96.14
  • 96.14
  • 95.32
  • 95.30
  • 94.72
  • 93.12
  • 90.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.17e3
  • 1.17e3
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.42e3
  • 1.42e3
  • 1.31e4
  • 1.34e4
  • 1.37e4
95.23
  • 95.23
  • 56.22
  • 54.97
  • 54.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.56e3
  • 1.56e3
  • 2.38e3
  • 3.33e3
  • 5.20e3
  • 5.27e3
94.78
  • 94.78
  • 92.05
  • 88.86
  • 82.60
  • 82.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.59e3
  • 1.59e3
94.68
  • 94.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
1.80e3
  • 1.80e3
  • 1.81e3
  • 1.87e3
  • 2.41e3
  • 2.47e3
  • 2.60e3
  • 3.20e3
  • 3.36e3
  • 3.43e3
  • 4.22e3
93.98
  • 93.98
  • 93.95
  • 93.73
  • 91.94
  • 91.72
  • 91.28
  • 89.30
  • 88.75
  • 88.52
  • 85.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
  • 1.96e3
  • 2.10e3
  • 2.12e3
  • 2.29e3
  • 2.51e3
  • 2.74e3
  • 2.78e3
  • 2.88e3
  • 3.57e3
  • 3.97e3
  • 4.28e3
  • 4.65e3
  • 4.98e3
  • 5.88e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.25e4
  • 1.39e4
  • 1.41e4
93.61
  • 93.61
  • 93.45
  • 92.97
  • 92.92
  • 92.32
  • 91.61
  • 90.82
  • 90.71
  • 90.36
  • 88.04
  • 86.72
  • 85.68
  • 84.42
  • 83.33
  • 80.30
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 58.30
  • 53.30
  • 52.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.16e3
  • 2.16e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
  • 2.89e3
91.32
  • 91.32
  • 90.32
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.81e3
  • 2.81e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.83e3
  • 2.83e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000104life cycle
2.97e3
  • 2.97e3
  • 3.43e3
  • 1.34e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
90.07
  • 90.07
  • 88.53
  • 54.99
  • 50.00
  • 49.99
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
  • 4.52e3
89.30
  • 89.30
  • 84.86
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.25e3
  • 3.25e3
  • 1.50e4
89.12
  • 89.12
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.68e3
  • 3.68e3
  • 3.86e3
  • 6.28e3
87.68
  • 87.68
  • 87.08
  • 78.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.46
  • 86.46
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.28
  • 86.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.43
  • 85.43
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.36e3
  • 4.36e3
  • 6.01e3
85.40
  • 85.40
  • 79.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.13
  • 85.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
85.08
  • 85.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.81
  • 82.81
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.97
  • 81.97
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.73
  • 79.73
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.03
  • 77.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
66.94
  • 66.94
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
  • 1.34e4
  • 1.49e4
62.50
  • 62.50
  • 55.24
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.34e4
  • 1.50e4
58.33
  • 58.33
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
  • 1.39e4
  • 1.49e4
55.53
  • 55.53
  • 53.55
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000055357 (leo1)
ZFINZDB-GENE-040426-2435 (leo1)
EMBLBC066443, CR848839
Uniprot/SWISSPROTLEO1_DANRE, Q6NYV9

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