D. rerio Gene: si:dkey-25e12.3 - ENSDARG00000055365 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055365
Namesi:dkey-25e12.3
Descriptionsi:dkey-25e12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-132]
OrganismDanio rerio (zebrafish)
Synonym(s)hint-3, hint3, q0v966, q1rma9, q5rgd5, zgc:136256, zgc:152680, zgc:63558, zgc:77855

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.16
  • 88.16
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
81.87
  • 81.87
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.31
  • 79.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.02
  • 78.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
6.73e3
  • 6.73e3
  • 1.21e4
  • 1.40e4
77.45
  • 77.45
  • 59.59
  • 53.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.51
  • 74.51
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.68e3
  • 8.68e3
  • 1.86e4
70.95
  • 70.95
  • 37.87
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.09
  • 65.09
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.26e4
  • 1.26e4
  • 1.53e4
57.65
  • 57.65
  • 48.89
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.59
  • 56.59
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.10
  • 50.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.36
  • 49.36
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.53e4
  • 1.53e4
48.80
  • 48.80
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.57e4
  • 1.57e4
  • 1.88e4
  • 1.95e4
  • 2.01e4
  • 2.03e4
47.33
  • 47.33
  • 36.90
  • 34.71
  • 32.69
  • 32.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.23
  • 46.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.41
  • 45.41
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.81e4
  • 1.81e4
  • 2.01e4
39.29
  • 39.29
  • 32.66
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC115055, BC121729, BC133849, BX537272, BX927255
EnsemblENSDARG00000055365 (si:dkey-25e12.3)
Uniprot/SWISSPROTHINT3_DANRE, Q5PNN8
ZFINZDB-GENE-041001-132 (si:dkey-25e12.3)

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