D. rerio Gene: zgc:163121 - ENSDARG00000055370 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055370
Namezgc:163121
Descriptionzgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
OrganismDanio rerio (zebrafish)
Orthologs(s)20 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.40e3
  • 9.40e3
  • 1.24e4
68.51
  • 68.51
  • 58.39
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.50e3
  • 9.50e3
  • 1.07e4
  • 1.15e4
  • 1.30e4
  • 1.80e4
68.18
  • 68.18
  • 64.24
  • 61.34
  • 56.50
  • 39.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.08e4
  • 1.08e4
  • 1.73e4
63.88
  • 63.88
  • 42.05
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.45e4
61.72
  • 61.72
  • 51.33
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
58.85
  • 58.85
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.32e4
  • 1.32e4
55.69
  • 55.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.93
  • 53.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.59
  • 21.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000055370.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000055370.

Cross-references

EnsemblENSDARG00000055370 (zgc:163121)
ZFINZDB-GENE-070424-80 (zgc:163121)
EMBLCR925777, CU693487
Uniprot/SPTREMBLB0V1P2, B0V1P2_DANRE, B0V1P3, B0V1P3_DANRE

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