D. rerio Gene: zgc:66160 - ENSDARG00000055383 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055383
Namezgc:66160
Descriptionzgc:66160 [Source:ZFIN;Acc:ZDB-GENE-030131-5510]
OrganismDanio rerio (zebrafish)
Synonym(s)fd20g11, wu:fd20g11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
  • 1.94e3
  • 4.97e3
  • 5.68e3
94.74
  • 94.74
  • 93.52
  • 83.35
  • 81.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.07
  • 93.07
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
2.26e3
  • 2.26e3
  • 4.24e3
  • 4.71e3
  • 4.89e3
  • 4.95e3
  • 5.26e3
  • 5.84e3
  • 5.92e3
  • 6.29e3
  • 6.63e3
92.43
  • 92.43
  • 85.80
  • 84.25
  • 83.61
  • 83.42
  • 82.37
  • 80.44
  • 80.18
  • 78.95
  • 77.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
2.67e3
  • 2.67e3
  • 2.96e3
  • 2.98e3
  • 3.56e3
  • 4.22e3
  • 4.56e3
  • 5.37e3
  • 5.72e3
  • 5.79e3
  • 6.06e3
  • 6.34e3
  • 6.50e3
  • 6.81e3
  • 9.19e3
91.05
  • 91.05
  • 90.09
  • 90.03
  • 88.09
  • 85.88
  • 84.74
  • 82.03
  • 80.85
  • 80.62
  • 79.72
  • 78.77
  • 78.23
  • 77.21
  • 69.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
3.23e3
  • 3.23e3
  • 3.29e3
  • 3.29e3
  • 3.42e3
  • 4.04e3
  • 4.55e3
89.20
  • 89.20
  • 89.00
  • 88.99
  • 88.55
  • 86.47
  • 84.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
89.01
  • 89.01
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.58e3
  • 3.58e3
88.02
  • 88.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.78e3
  • 3.78e3
  • 4.42e3
  • 4.42e3
  • 4.65e3
  • 4.81e3
87.36
  • 87.36
  • 85.20
  • 85.19
  • 84.44
  • 83.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.92e3
  • 3.92e3
86.87
  • 86.87
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.25e3
  • 4.25e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.26e3
  • 4.26e3
85.74
  • 85.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
  • 6.41e3
84.65
  • 84.65
  • 78.55
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
  • 5.16e3
83.94
  • 83.94
  • 82.74
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.30
  • 83.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.05e3
  • 5.05e3
  • 6.00e3
83.10
  • 83.10
  • 79.92
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
5.06e3
  • 5.06e3
  • 5.84e3
  • 6.48e3
83.07
  • 83.07
  • 80.46
  • 78.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.89
  • 82.89
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.45e3
  • 5.45e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.53
  • 81.53
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.03
  • 81.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.62
  • 79.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.73e3
  • 6.73e3
77.45
  • 77.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.10
  • 67.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR396594
EnsemblENSDARG00000055383 (zgc:66160)
Uniprot/SPTREMBLF1Q4T4, F1Q4T4_DANRE
ZFINZDB-GENE-030131-5510 (zgc:66160)

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