D. rerio Gene: vtna - ENSDARG00000055388 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055388
Namevtna
Descriptionvitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:112277

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
715
  • 715
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.60e3
  • 2.60e3
  • 3.22e3
91.28
  • 91.28
  • 89.23
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.56e3
  • 3.56e3
  • 1.46e4
  • 1.47e4
88.10
  • 88.10
  • 51.12
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
5.35e3
  • 5.35e3
  • 5.58e3
  • 7.22e3
  • 8.58e3
  • 9.76e3
82.08
  • 82.08
  • 81.31
  • 75.83
  • 71.29
  • 67.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 1.44e4
  • 2.07e4
59.59
  • 59.59
  • 51.62
  • 30.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.45e4
  • 1.45e4
  • 1.76e4
51.38
  • 51.38
  • 41.19
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.75
  • 50.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.07
  • 44.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.68e4
  • 1.68e4
43.84
  • 43.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.73e4
  • 1.73e4
42.21
  • 42.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.44
  • 41.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.35
  • 41.35
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.34
  • 37.34
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.53
  • 36.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.11
  • 25.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR522882
EnsemblENSDARG00000055388 (vtna)
Uniprot/SPTREMBLF1R4H1, F1R4H1_DANRE
ZFINZDB-GENE-050522-440 (vtna)

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