D. rerio Gene: foxq1b - ENSDARG00000055395 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055395
Namefoxq1b
Descriptionforkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
OrganismDanio rerio (zebrafish)
Synonym(s)foxq1, zgc:77469

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
80.10
  • 80.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.49e3
  • 7.49e3
  • 1.16e4
74.93
  • 74.93
  • 61.19
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
9.68e3
  • 9.68e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.17
  • 67.17
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.81e3
  • 9.81e3
  • 1.29e4
67.17
  • 67.17
  • 56.66
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.06e4
  • 1.06e4
  • 1.23e4
  • 1.23e4
  • 1.50e4
  • 1.85e4
64.58
  • 64.58
  • 58.84
  • 58.68
  • 49.79
  • 38.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.93
  • 63.93
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
  • 1.43e4
  • 1.49e4
62.44
  • 62.44
  • 51.99
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
60.07
  • 60.07
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.21e4
  • 1.21e4
  • 1.69e4
59.59
  • 59.59
  • 43.54
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.25e4
  • 1.25e4
  • 1.28e4
58.27
  • 58.27
  • 57.19
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.37
  • 56.37
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.60e4
  • 1.60e4
46.43
  • 46.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.69
  • 45.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.36
  • 43.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.63
  • 38.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.80
  • 36.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.88
  • 30.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.69
  • 29.69
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.98
  • 27.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX510653
EnsemblENSDARG00000055395 (foxq1b)
Uniprot/SPTREMBLF1R4G9, F1R4G9_DANRE, Q1LWZ9, Q1LWZ9_DANRE
ZFINZDB-GENE-040426-2090 (foxq1b)

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