D. rerio Gene: si:dkey-56f14.7 - ENSDARG00000055400 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055400
Namesi:dkey-56f14.7
Descriptionsi:dkey-56f14.7 [Source:ZFIN;Acc:ZDB-GENE-131121-78]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
654
  • 654
  • 1.50e4
97.81
  • 97.81
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
887
  • 887
  • 2.82e3
97.03
  • 97.03
  • 90.56
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.90e3
  • 1.90e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
2.24e3
  • 2.24e3
  • 3.76e3
  • 1.31e4
  • 1.55e4
  • 1.56e4
92.52
  • 92.52
  • 87.42
  • 56.25
  • 47.98
  • 47.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.51e3
  • 2.51e3
  • 6.54e3
91.59
  • 91.59
  • 78.11
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.45e3
  • 3.45e3
  • 1.49e4
88.45
  • 88.45
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.96
  • 80.96
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.51e3
  • 6.51e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
75.23
  • 75.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.69
  • 74.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.51
  • 67.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.03e4
  • 1.03e4
  • 1.83e4
65.45
  • 65.45
  • 38.75
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.95
  • 60.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.39e4
  • 1.39e4
  • 1.83e4
53.51
  • 53.51
  • 38.80
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.68
  • 52.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.85
  • 49.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.99
  • 46.99
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.62e4
  • 1.62e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.91
  • 32.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR848666
EnsemblENSDARG00000055400 (si:dkey-56f14.7)
Uniprot/SPTREMBLX1WBN8, X1WBN8_DANRE, X1WFA8, X1WFA8_DANRE
ZFINZDB-GENE-131121-78 (si:dkey-56f14.7)

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