D. rerio Gene: serpinb1 - ENSDARG00000055416 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055416
Nameserpinb1
Descriptionserpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-177p2.11, si:dkey-177p2.12, zgc:91981

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
364
  • 364
98.78
  • 98.78
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
953
  • 953
  • 3.38e3
96.81
  • 96.81
  • 88.68
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.00e3
  • 1.00e3
  • 1.09e4
96.65
  • 96.65
  • 63.56
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
93.81
  • 93.81
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
2.05e3
  • 2.05e3
  • 4.47e3
  • 5.26e3
  • 5.64e3
  • 6.70e3
93.13
  • 93.13
  • 85.03
  • 82.38
  • 81.10
  • 77.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
4.75e3
  • 4.75e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.91e3
  • 7.97e3
  • 8.30e3
  • 8.79e3
84.08
  • 84.08
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 73.52
  • 73.32
  • 72.21
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.30
  • 79.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.24
  • 73.24
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.56e3
  • 8.56e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
  • 1.09e4
66.89
  • 66.89
  • 63.43
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
66.82
  • 66.82
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.04
  • 65.04
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.15e4
  • 1.15e4
  • 1.38e4
61.57
  • 61.57
  • 53.89
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.29e4
  • 1.29e4
  • 1.31e4
  • 1.38e4
  • 1.38e4
  • 1.39e4
  • 1.39e4
  • 1.39e4
56.65
  • 56.65
  • 56.23
  • 53.83
  • 53.83
  • 53.55
  • 53.55
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.31e4
  • 1.31e4
  • 1.32e4
56.19
  • 56.19
  • 55.84
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.23
  • 44.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC076524, BC133835, BC165869, BX248515
EnsemblENSDARG00000055416 (serpinb1)
Uniprot/SPTREMBLQ6DG30, Q6DG30_DANRE
ZFINZDB-GENE-040718-400 (serpinb1)

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