D. rerio Gene: zcchc7 - ENSDARG00000055443 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055443
Namezcchc7
Descriptionzinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
OrganismDanio rerio (zebrafish)
Synonym(s)chunp6893, flj22611l, zcchc7l

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.73e3
  • 2.73e3
  • 3.91e3
  • 7.64e3
  • 9.31e3
  • 9.89e3
90.84
  • 90.84
  • 86.91
  • 74.42
  • 68.82
  • 66.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
3.88e3
  • 3.88e3
  • 6.75e3
  • 6.90e3
  • 7.20e3
  • 7.24e3
  • 7.50e3
  • 7.66e3
  • 9.11e3
  • 1.07e4
  • 1.12e4
  • 1.16e4
  • 1.17e4
  • 1.18e4
  • 1.19e4
87.02
  • 87.02
  • 77.40
  • 76.91
  • 75.88
  • 75.76
  • 74.89
  • 74.36
  • 69.49
  • 64.08
  • 62.62
  • 61.18
  • 60.96
  • 60.58
  • 60.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.94
  • 82.94
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.55e3
  • 5.55e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
6.52e3
  • 6.52e3
  • 7.26e3
  • 1.03e4
  • 1.04e4
  • 1.06e4
  • 1.07e4
78.18
  • 78.18
  • 75.70
  • 65.61
  • 65.34
  • 64.51
  • 64.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.33e3
  • 7.33e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.33e3
  • 9.33e3
68.77
  • 68.77
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.37e3
  • 9.37e3
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
9.43e3
  • 9.43e3
  • 9.63e3
  • 1.04e4
  • 1.08e4
  • 1.09e4
  • 1.09e4
  • 1.13e4
  • 1.27e4
  • 1.28e4
  • 1.30e4
68.43
  • 68.43
  • 67.75
  • 65.15
  • 63.94
  • 63.63
  • 63.51
  • 62.25
  • 57.52
  • 57.26
  • 56.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.38
  • 68.38
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.50e3
  • 9.50e3
68.19
  • 68.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.64
  • 67.64
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.72e3
  • 9.72e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
  • 1.19e4
64.61
  • 64.61
  • 60.20
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.06e4
  • 1.06e4
  • 1.16e4
64.52
  • 64.52
  • 61.18
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.50e4
62.47
  • 62.47
  • 49.88
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.63
  • 61.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
  • 1.19e4
61.17
  • 61.17
  • 60.21
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.14
  • 61.14
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.03
  • 55.03
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.38e4
  • 1.38e4
  • 1.47e4
  • 1.47e4
53.72
  • 53.72
  • 50.93
  • 50.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.52
  • 53.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX284619, BX511134, CR786570
EnsemblENSDARG00000055443 (zcchc7)
Uniprot/SPTREMBLF1QLY2, F1QLY2_DANRE
ZFINZDB-GENE-030102-2 (zcchc7)

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