D. rerio Gene: cdc16 - ENSDARG00000055470 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055470
Namecdc16
Descriptioncell division cycle 16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051113-132]
OrganismDanio rerio (zebrafish)
Synonym(s)vij, zgc:123264
Orthologs(s)23 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
  • 5.77e3
  • 9.96e3
  • 1.17e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.30e4
  • 1.45e4
94.85
  • 94.85
  • 80.67
  • 66.65
  • 60.70
  • 59.08
  • 59.08
  • 58.32
  • 56.38
  • 51.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.76e3
  • 1.76e3
  • 1.50e4
94.11
  • 94.11
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.29e3
  • 2.29e3
  • 3.00e3
92.32
  • 92.32
  • 89.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
  • 8.05e3
  • 1.21e4
92.31
  • 92.31
  • 73.06
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.00e3
  • 3.00e3
89.95
  • 89.95
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.63e3
  • 3.63e3
  • 3.96e3
87.86
  • 87.86
  • 86.75
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.83e3
  • 3.83e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.67
  • 84.67
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.96e3
  • 4.96e3
83.40
  • 83.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
5.20e3
  • 5.20e3
  • 6.17e3
  • 7.09e3
  • 7.92e3
  • 1.14e4
82.59
  • 82.59
  • 79.36
  • 76.25
  • 73.48
  • 61.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.43
  • 81.43
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.85e3
  • 5.85e3
  • 1.01e4
80.42
  • 80.42
  • 66.18
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.58e3
  • 6.58e3
  • 1.50e4
77.96
  • 77.96
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.49e3
  • 7.49e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
  • 1.12e4
  • 1.55e4
73.04
  • 73.04
  • 62.50
  • 48.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.08
  • 67.08
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
66.83
  • 66.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.39
  • 64.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.61
  • 62.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.35
  • 62.35
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.30
  • 59.30
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0001007digestive system
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000055470.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000055470.

Cross-references

EnsemblENSDARG00000055470 (cdc16)
ZFINZDB-GENE-051113-132 (cdc16)
EMBLBX601644, CR936415
Uniprot/SPTREMBLB0S729, B0S729_DANRE, B0V222, B0V222_DANRE

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