D. rerio Gene: mmp20b - ENSDARG00000055479 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055479
Namemmp20b
Descriptionmatrix metallopeptidase 20b (enamelysin) [Source:ZFIN;Acc:ZDB-GENE-100603-3]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-54n8.3, zmp:0000000654

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.15e4
  • 1.15e4
  • 1.53e4
61.61
  • 61.61
  • 48.69
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.10
  • 52.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 1.69e4
50.55
  • 50.55
  • 43.41
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.62e4
  • 1.62e4
45.76
  • 45.76
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.07
  • 45.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.04
  • 43.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.67
  • 33.67
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.07e4
  • 2.07e4
  • 2.22e4
  • 2.23e4
  • 2.29e4
30.61
  • 30.61
  • 25.59
  • 25.26
  • 23.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.52
  • 30.52
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.17e4
  • 2.17e4
  • 2.27e4
27.43
  • 27.43
  • 24.13
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.76
  • 23.76
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.70
  • 23.70
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.20
  • 23.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000055479 (mmp20b)
ZFINZDB-GENE-100603-3 (mmp20b)
Uniprot/SPTREMBLE7F3C3, E7F3C3_DANRE

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