D. rerio Gene: atf7b - ENSDARG00000055481 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055481
Nameatf7b
Descriptionactivating transcription factor 7b [Source:ZFIN;Acc:ZDB-GENE-030131-3028]
OrganismDanio rerio (zebrafish)
Synonym(s)fa97a09, fc25b12, wu:fa97a09, wu:fc25b12

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
854
  • 854
  • 1.54e3
  • 2.47e3
  • 3.45e3
97.14
  • 97.14
  • 94.86
  • 91.72
  • 88.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.08e3
  • 1.08e3
  • 1.08e3
  • 2.30e3
  • 3.02e3
  • 3.85e3
96.40
  • 96.40
  • 96.38
  • 92.29
  • 89.88
  • 87.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.31e3
  • 1.31e3
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
  • 2.91e3
  • 4.09e3
  • 4.98e3
  • 5.11e3
  • 5.19e3
  • 5.29e3
  • 5.36e3
  • 5.62e3
  • 5.65e3
  • 5.86e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.57e3
  • 7.57e3
  • 7.78e3
  • 7.91e3
  • 8.22e3
  • 8.96e3
  • 8.96e3
  • 1.44e4
95.53
  • 95.53
  • 90.25
  • 86.31
  • 83.33
  • 82.89
  • 82.63
  • 82.28
  • 82.04
  • 81.18
  • 81.09
  • 80.38
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.65
  • 74.64
  • 73.95
  • 73.52
  • 72.48
  • 69.99
  • 69.99
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.01e3
  • 2.01e3
  • 4.96e3
93.27
  • 93.27
  • 83.39
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
92.01
  • 92.01
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.52e3
  • 2.52e3
91.55
  • 91.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.97e3
  • 2.97e3
  • 3.81e3
90.06
  • 90.06
  • 87.25
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
88.73
  • 88.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
3.37e3
  • 3.37e3
  • 4.14e3
  • 4.70e3
  • 5.40e3
  • 6.26e3
  • 6.34e3
  • 6.47e3
  • 6.73e3
  • 7.06e3
  • 7.94e3
88.72
  • 88.72
  • 86.14
  • 84.28
  • 81.94
  • 79.03
  • 78.79
  • 78.32
  • 77.46
  • 76.37
  • 73.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.61e3
  • 3.61e3
  • 4.43e3
  • 4.94e3
87.92
  • 87.92
  • 85.19
  • 83.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.71e3
  • 3.71e3
87.58
  • 87.58
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.88e3
  • 3.88e3
86.99
  • 86.99
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.99
  • 86.99
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.53
  • 86.53
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.32
  • 86.32
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
4.14e3
  • 4.14e3
  • 4.80e3
  • 1.12e4
86.14
  • 86.14
  • 83.93
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
85.67
  • 85.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.10
  • 84.10
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.80e3
  • 4.80e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.00e3
  • 5.00e3
  • 7.00e3
83.26
  • 83.26
  • 76.55
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
5.26e3
  • 5.26e3
  • 6.47e3
  • 7.25e3
  • 7.63e3
  • 7.63e3
  • 7.66e3
82.39
  • 82.39
  • 78.33
  • 75.74
  • 74.46
  • 74.44
  • 74.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.73
  • 81.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.30
  • 81.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.88e3
  • 5.88e3
80.30
  • 80.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.66
  • 67.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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