D. rerio Gene: si:ch211-37e10.1 - ENSDARG00000055506 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055506
Namesi:ch211-37e10.1
Descriptionsi:ch211-37e10.1 [Source:ZFIN;Acc:ZDB-GENE-131127-547]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.74e3
  • 4.74e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.20e4
  • 1.20e4
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.11
  • 59.11
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.52e4
  • 1.52e4
48.94
  • 48.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.19
  • 47.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.04
  • 47.04
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
  • 2.39e4
42.84
  • 42.84
  • 20.10
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.71e4
  • 1.71e4
42.62
  • 42.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.50
  • 42.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 2.21e4
37.74
  • 37.74
  • 25.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
2.05e4
  • 2.05e4
  • 2.07e4
  • 2.19e4
  • 2.34e4
31.24
  • 31.24
  • 30.77
  • 26.72
  • 21.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.21
  • 31.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.28
  • 27.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000055506 (si:ch211-37e10.1)
Uniprot/SPTREMBLF1R8T5, F1R8T5_DANRE, X1WDR2, X1WDR2_DANRE
ZFINZDB-GENE-131127-547 (si:ch211-37e10.1)

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