D. rerio Gene: rnf7 - ENSDARG00000055524 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055524
Namernf7
Descriptionring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
OrganismDanio rerio (zebrafish)
Synonym(s)fj63f04, wu:fj63f04, zgc:110737

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
216
  • 216
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
728
  • 728
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
766
  • 766
  • 1.91e3
97.44
  • 97.44
  • 93.60
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
916
  • 916
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
919
  • 919
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
948
  • 948
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
981
  • 981
  • 1.50e3
  • 2.66e3
  • 3.15e3
96.72
  • 96.72
  • 94.99
  • 91.11
  • 89.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
991
  • 991
  • 1.05e3
  • 1.21e3
  • 1.25e3
  • 2.51e3
  • 3.02e3
  • 3.39e3
  • 3.80e3
  • 4.32e3
  • 4.70e3
96.68
  • 96.68
  • 96.49
  • 95.96
  • 95.80
  • 91.59
  • 89.90
  • 88.66
  • 87.28
  • 85.53
  • 84.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.52
  • 96.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
  • 2.39e3
96.46
  • 96.46
  • 92.02
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.14e3
  • 1.14e3
  • 2.33e3
  • 3.05e3
96.19
  • 96.19
  • 92.21
  • 89.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.18
  • 95.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.15
  • 94.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.81e3
  • 1.81e3
  • 2.02e3
  • 2.39e3
  • 2.41e3
  • 2.51e3
  • 2.55e3
  • 2.57e3
  • 2.61e3
  • 2.94e3
  • 3.04e3
  • 3.72e3
  • 4.13e3
  • 4.62e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.61e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
93.93
  • 93.93
  • 93.24
  • 91.99
  • 91.92
  • 91.60
  • 91.48
  • 91.39
  • 91.26
  • 90.17
  • 89.83
  • 87.56
  • 86.18
  • 84.53
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.52
  • 73.52
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
  • 2.31e3
93.81
  • 93.81
  • 92.26
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.78
  • 93.78
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.44e3
  • 2.44e3
91.85
  • 91.85
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
2.53e3
  • 2.53e3
  • 5.33e3
  • 5.71e3
  • 6.94e3
  • 7.09e3
  • 7.13e3
91.52
  • 91.52
  • 82.15
  • 80.90
  • 76.75
  • 76.25
  • 76.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.63e3
  • 2.63e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.74
  • 90.74
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
  • 5.99e3
89.87
  • 89.87
  • 79.94
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.14e3
  • 4.14e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.17e3
  • 6.17e3
  • 6.96e3
  • 7.02e3
  • 9.17e3
  • 9.98e3
79.34
  • 79.34
  • 76.71
  • 76.50
  • 69.30
  • 66.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.04e3
  • 8.04e3
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.27
  • 62.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.07
  • 49.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC090163, CU459064
EnsemblENSDARG00000055524 (rnf7)
Uniprot/SPTREMBLQ5EB19, Q5EB19_DANRE
ZFINZDB-GENE-050220-12 (rnf7)

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