D. rerio Gene: FOXN2 (1 to many) - ENSDARG00000055574 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055574
NameFOXN2 (1 to many)
Descriptionforkhead box N2 [Source:HGNC Symbol;Acc:HGNC:5281]
OrganismDanio rerio (zebrafish)
Synonym(s)htlf
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.82e3
  • 2.82e3
90.56
  • 90.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.78e3
  • 8.78e3
  • 1.24e4
70.60
  • 70.60
  • 58.57
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.92
  • 68.92
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.10e4
  • 1.72e4
  • 1.79e4
  • 1.97e4
63.72
  • 63.72
  • 63.09
  • 42.36
  • 39.99
  • 33.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
55.89
  • 55.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.34e4
  • 1.34e4
  • 1.81e4
55.08
  • 55.08
  • 39.49
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.40
  • 53.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.31
  • 51.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.41
  • 50.41
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.73
  • 49.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.59
  • 49.59
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.56e4
  • 1.56e4
  • 1.66e4
47.70
  • 47.70
  • 44.53
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.84
  • 45.84
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.67
  • 42.67
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.73e4
  • 1.73e4
  • 1.73e4
42.23
  • 42.23
  • 42.11
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.87e4
  • 1.87e4
  • 2.26e4
37.43
  • 37.43
  • 24.16
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.97
  • 30.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000055574.

Cross-references

EnsemblENSDARG00000055574 (FOXN2 (1 to many))
HGNCHGNC:5281 (FOXN2 (1 to many))
EMBLCABZ01056727, CABZ01056728
Uniprot/SPTREMBLE7F234, E7F234_DANRE

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