D. rerio Gene: clul1 - ENSDARG00000055595 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055595
Nameclul1
Descriptionclusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
OrganismDanio rerio (zebrafish)
Synonym(s)loc559018, wu:fb51b10
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
184
  • 184
  • 670
99.39
  • 99.39
  • 97.76
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
2.78e3
  • 2.78e3
  • 1.65e4
  • 1.66e4
  • 1.78e4
  • 1.92e4
  • 2.40e4
90.71
  • 90.71
  • 44.62
  • 44.33
  • 40.40
  • 35.62
  • 19.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.51e3
  • 6.51e3
  • 1.61e4
  • 1.75e4
78.19
  • 78.19
  • 45.99
  • 41.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.01e4
  • 1.01e4
  • 1.50e4
  • 1.50e4
  • 1.58e4
  • 1.64e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
66.31
  • 66.31
  • 49.92
  • 49.81
  • 47.08
  • 45.16
  • 40.18
  • 39.42
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.92
  • 53.92
AEIR
  • AEIR
CL:0000210photoreceptor cell
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011362cranial blood vasculature
  • ZFS:0000028Segmentation:26+ somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.64
  • 46.64
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
  • 2.03e4
39.60
  • 39.60
  • 32.18
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.34
  • 27.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.96
  • 24.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.38e4
  • 2.38e4
20.38
  • 20.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000055595 (clul1)
ZFINZDB-GENE-031118-57 (clul1)
EMBLBC171413, BC171415, BX927088
Uniprot/SPTREMBLA5PMY7, A5PMY7_DANRE, A5PMY8, A5PMY8_DANRE

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