D. rerio Gene: zgc:153345 - ENSDARG00000055622 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055622
Namezgc:153345
Descriptionzgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
296
  • 296
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
435
  • 435
98.55
  • 98.55
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
2.26e3
  • 2.26e3
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.78e4
  • 1.83e4
92.43
  • 92.43
  • 50.90
  • 50.61
  • 50.25
  • 40.38
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.32
  • 90.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.97
  • 86.97
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.68e3
  • 4.68e3
84.34
  • 84.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.21e3
  • 6.21e3
  • 7.13e3
  • 9.59e3
  • 1.13e4
  • 1.34e4
79.19
  • 79.19
  • 76.12
  • 67.88
  • 62.19
  • 55.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.90
  • 76.90
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.92
  • 75.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.20e3
  • 7.20e3
75.91
  • 75.91
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
  • 1.49e4
72.60
  • 72.60
  • 50.22
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.84
  • 60.84
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.92
  • 59.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.41e4
  • 1.41e4
  • 1.41e4
52.88
  • 52.88
  • 52.74
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.85
  • 42.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.48
  • 42.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.97
  • 37.97
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.92e4
  • 1.92e4
  • 2.08e4
35.60
  • 35.60
  • 30.34
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.92e4
  • 1.92e4
  • 1.96e4
  • 2.18e4
35.56
  • 35.56
  • 34.48
  • 27.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.46
  • 33.46
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.98
  • 32.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.79
  • 26.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX088525
EnsemblENSDARG00000055622 (zgc:153345)
Uniprot/SPTREMBLF1R6J8, F1R6J8_DANRE, F1RAC8, F1RAC8_DANRE
ZFINZDB-GENE-061103-487 (zgc:153345)

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