D. rerio Gene: foxh1 - ENSDARG00000055630 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055630
Namefoxh1
Descriptionforkhead box H1 [Source:ZFIN;Acc:ZDB-GENE-000616-15]
OrganismDanio rerio (zebrafish)
Synonym(s)etid62177.12, fast, fast1, fe26b06, schmalspur, sur, uncle freddy, unf, wu:fe26b06, wu:fi30c08, wu:fi32b01

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
880
  • 880
  • 1.63e3
  • 2.15e3
  • 2.63e3
  • 3.36e3
  • 4.54e3
97.06
  • 97.06
  • 94.53
  • 92.81
  • 91.19
  • 88.77
  • 84.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.08e3
  • 1.08e3
  • 1.91e3
  • 2.47e3
  • 6.74e3
  • 7.39e3
96.37
  • 96.37
  • 93.61
  • 91.72
  • 77.44
  • 75.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
2.37e3
  • 2.37e3
  • 4.22e3
  • 5.28e3
  • 6.84e3
  • 6.85e3
  • 1.02e4
  • 1.34e4
  • 1.36e4
  • 1.41e4
  • 1.53e4
  • 1.61e4
92.05
  • 92.05
  • 85.87
  • 82.33
  • 77.10
  • 77.06
  • 65.95
  • 55.14
  • 54.61
  • 52.63
  • 48.64
  • 46.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.85e3
  • 2.85e3
90.47
  • 90.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
  • 1.50e4
87.38
  • 87.38
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.78
  • 82.78
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.54
  • 79.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
6.89e3
  • 6.89e3
  • 7.03e3
  • 8.54e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.96e3
  • 1.41e4
76.92
  • 76.92
  • 76.46
  • 71.41
  • 69.98
  • 69.43
  • 69.43
  • 66.65
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.82
  • 72.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000034Hatching:Pec-fin
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.68e4
  • 1.87e4
66.67
  • 66.67
  • 43.80
  • 37.45
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • ZFS:0000014Blastula:Sphere
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0006222future diencephalon
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.03e4
66.66
  • 66.66
  • 66.66
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.07e4
  • 1.41e4
66.65
  • 66.65
  • 66.65
  • 64.27
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.05e4
  • 1.05e4
  • 1.34e4
  • 1.44e4
  • 1.88e4
  • 2.04e4
  • 2.04e4
64.99
  • 64.99
  • 55.25
  • 51.62
  • 37.05
  • 31.63
  • 31.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
  • 1.09e4
  • 1.09e4
  • 1.32e4
64.98
  • 64.98
  • 63.61
  • 63.61
  • 55.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000014Blastula:Sphere
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.30
  • 56.30
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000034Hatching:Pec-fin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.49e4
  • 1.60e4
54.99
  • 54.99
  • 50.00
  • 46.34
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.76
  • 54.76
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • ZFS:0000034Hatching:Pec-fin
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • ZFS:0000034Hatching:Pec-fin
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.66e4
  • 1.66e4
44.32
  • 44.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.53
  • 42.53
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.25
  • 41.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX640453
EnsemblENSDARG00000055630 (foxh1)
Uniprot/SPTREMBLF1R6J3, F1R6J3_DANRE
ZFINZDB-GENE-000616-15 (foxh1)

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