D. rerio Gene: GPT (1 to many) - ENSDARG00000055642 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055642
NameGPT (1 to many)
Descriptionsi:ch211-217a12.1 [Source:ZFIN;Acc:ZDB-GENE-121214-95]
OrganismDanio rerio (zebrafish)
Synonym(s)alt1, gpt1
Orthologs(s)6 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
657
  • 657
97.80
  • 97.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
947
  • 947
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
  • 1.27e4
81.19
  • 81.19
  • 57.37
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.91e3
  • 5.91e3
  • 1.05e4
80.22
  • 80.22
  • 64.85
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.29
  • 79.29
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.47e3
  • 6.47e3
  • 2.20e4
78.35
  • 78.35
  • 26.29
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.32
  • 78.32
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
6.70e3
  • 6.70e3
  • 9.73e3
  • 1.06e4
  • 1.10e4
  • 1.32e4
77.58
  • 77.58
  • 67.41
  • 64.67
  • 63.27
  • 55.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.95e3
  • 9.95e3
66.68
  • 66.68
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.55
  • 60.55
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.23e4
  • 1.23e4
  • 1.46e4
58.89
  • 58.89
  • 51.09
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.48
  • 58.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.24e4
  • 1.24e4
  • 1.57e4
58.46
  • 58.46
  • 47.46
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.55
  • 48.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.01e4
  • 2.01e4
32.82
  • 32.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.36
  • 27.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000055642.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000055642.

Cross-references

EnsemblENSDARG00000055642 (GPT (1 to many))
HGNCHGNC:4552 (GPT (1 to many))
ZFINZDB-GENE-121214-95 (si:ch211-217a12.1)

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