D. rerio Gene: pdzd3b - ENSDARG00000055656 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055656
Namepdzd3b
DescriptionPDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:194812

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.24e3
  • 9.24e3
  • 2.45e4
69.07
  • 69.07
  • 17.88
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.97
  • 65.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.90
  • 57.90
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.55e4
  • 1.55e4
48.16
  • 48.16
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
  • 2.41e4
47.85
  • 47.85
  • 19.21
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.69
  • 40.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.63
  • 27.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.43
  • 27.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.99
  • 25.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.57
  • 20.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX294376
EnsemblENSDARG00000055656 (pdzd3b)
Uniprot/SPTREMBLF1R510, F1R510_DANRE
ZFINZDB-GENE-081022-151 (pdzd3b)

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