D. rerio Gene: ino80c - ENSDARG00000055719 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055719
Nameino80c
DescriptionINO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
OrganismDanio rerio (zebrafish)
Synonym(s)fj61b08, wu:fj61b08, zgc:86850

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
  • 1.45e4
94.78
  • 94.78
  • 51.36
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.06
  • 93.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.59
  • 91.59
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.47
  • 91.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
2.82e3
  • 2.82e3
  • 4.28e3
  • 5.53e3
  • 5.93e3
  • 6.12e3
90.57
  • 90.57
  • 85.66
  • 81.49
  • 80.15
  • 79.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.43
  • 90.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
3.27e3
  • 3.27e3
  • 3.98e3
  • 5.25e3
  • 5.53e3
  • 6.10e3
  • 6.49e3
89.07
  • 89.07
  • 86.69
  • 82.41
  • 81.47
  • 79.56
  • 78.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.28
  • 88.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.54e3
  • 3.54e3
  • 6.81e3
88.15
  • 88.15
  • 77.20
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
  • 7.56e3
88.09
  • 88.09
  • 74.70
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.63e3
  • 3.63e3
87.86
  • 87.86
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.72e3
  • 3.72e3
87.55
  • 87.55
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.92
  • 86.92
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.99e3
  • 3.99e3
  • 5.05e3
  • 5.16e3
  • 5.17e3
  • 5.21e3
  • 5.29e3
  • 5.31e3
  • 5.96e3
  • 7.24e3
  • 1.05e4
86.66
  • 86.66
  • 83.10
  • 82.72
  • 82.69
  • 82.56
  • 82.28
  • 82.23
  • 80.03
  • 75.77
  • 64.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
4.25e3
  • 4.25e3
  • 4.31e3
  • 4.38e3
  • 4.50e3
  • 4.57e3
  • 4.93e3
  • 5.09e3
  • 5.10e3
  • 5.81e3
  • 5.88e3
  • 6.05e3
  • 6.49e3
  • 6.52e3
  • 7.39e3
  • 1.44e4
  • 1.50e4
85.76
  • 85.76
  • 85.58
  • 85.32
  • 84.92
  • 84.69
  • 83.48
  • 82.96
  • 82.93
  • 80.55
  • 80.32
  • 79.76
  • 78.27
  • 78.17
  • 75.25
  • 51.82
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
85.68
  • 85.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.74e3
  • 4.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.03e3
  • 5.03e3
  • 6.44e3
  • 1.45e4
83.16
  • 83.16
  • 78.45
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.57
  • 81.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.55
  • 81.55
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.73e3
  • 5.73e3
  • 5.94e3
  • 8.30e3
80.82
  • 80.82
  • 80.11
  • 72.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.80e3
  • 5.80e3
  • 9.00e3
80.58
  • 80.58
  • 69.85
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.27
  • 80.27
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.31e3
  • 6.31e3
78.88
  • 78.88
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.73e3
  • 6.73e3
77.48
  • 77.48
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.98e3
  • 6.98e3
76.65
  • 76.65
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.14e3
  • 7.14e3
  • 7.32e3
  • 7.32e3
  • 8.02e3
76.08
  • 76.08
  • 75.51
  • 75.51
  • 73.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.28e3
  • 7.28e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX548254
EnsemblENSDARG00000055719 (ino80c)
Uniprot/SPTREMBLF1R4X0, F1R4X0_DANRE
ZFINZDB-GENE-040625-97 (ino80c)

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