D. rerio Gene: tmem9 - ENSDARG00000055757 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055757
Nametmem9
Descriptiontransmembrane protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-6083]
OrganismDanio rerio (zebrafish)
Synonym(s)fi33g11, wu:fi33g11, zgc:55432
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
  • 1.26e4
  • 1.41e4
94.58
  • 94.58
  • 57.91
  • 52.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.75e3
  • 1.75e3
  • 5.02e3
  • 9.88e3
  • 9.90e3
94.15
  • 94.15
  • 83.20
  • 66.91
  • 66.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.39e3
  • 3.39e3
  • 4.88e3
88.65
  • 88.65
  • 83.65
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.59
  • 84.59
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.31
  • 82.31
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
6.35e3
  • 6.35e3
  • 1.11e4
  • 1.11e4
  • 1.15e4
  • 1.19e4
  • 1.20e4
  • 1.44e4
  • 1.44e4
  • 1.45e4
  • 1.55e4
78.73
  • 78.73
  • 62.95
  • 62.94
  • 61.36
  • 60.04
  • 59.91
  • 51.93
  • 51.65
  • 51.50
  • 48.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.95
  • 77.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.82e3
  • 6.82e3
77.16
  • 77.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.92e3
  • 6.92e3
  • 1.04e4
76.84
  • 76.84
  • 65.08
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.73
  • 76.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.32e3
  • 7.32e3
75.51
  • 75.51
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.36e3
  • 7.36e3
75.35
  • 75.35
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.44e3
  • 7.44e3
75.09
  • 75.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
8.76e3
  • 8.76e3
  • 9.40e3
  • 1.04e4
  • 1.05e4
  • 1.37e4
70.67
  • 70.67
  • 68.52
  • 65.27
  • 64.92
  • 54.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
69.48
  • 69.48
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.14
  • 69.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
9.25e3
  • 9.25e3
  • 1.17e4
  • 1.17e4
  • 1.28e4
  • 1.28e4
  • 1.51e4
69.03
  • 69.03
  • 60.95
  • 60.87
  • 57.16
  • 57.12
  • 49.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.92
  • 67.92
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.66e3
  • 9.66e3
  • 1.00e4
  • 1.28e4
67.64
  • 67.64
  • 66.35
  • 57.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.64
  • 64.64
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000042Juvenile:Days 30-44
1.07e4
  • 1.07e4
  • 1.09e4
  • 1.35e4
  • 1.35e4
  • 1.35e4
  • 1.36e4
  • 1.36e4
  • 1.37e4
  • 1.38e4
  • 1.42e4
  • 1.43e4
  • 1.45e4
  • 1.45e4
  • 1.47e4
  • 1.50e4
  • 1.50e4
  • 1.51e4
64.33
  • 64.33
  • 63.53
  • 54.73
  • 54.65
  • 54.64
  • 54.55
  • 54.46
  • 54.04
  • 53.69
  • 52.56
  • 52.15
  • 51.56
  • 51.45
  • 50.90
  • 49.92
  • 49.80
  • 49.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.09e4
  • 1.09e4
63.45
  • 63.45
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.09e4
  • 1.09e4
63.39
  • 63.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.28e4
  • 1.28e4
57.26
  • 57.26
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.29e4
  • 1.29e4
56.84
  • 56.84
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.30e4
  • 1.30e4
  • 1.36e4
56.54
  • 56.54
  • 54.57
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.33
  • 55.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria18 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000055757.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000055757.

Cross-references

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