D. rerio Gene: SLC3A2 (1 to many) - ENSDARG00000055791 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055791
NameSLC3A2 (1 to many)
Descriptionzgc:158423 [Source:ZFIN;Acc:ZDB-GENE-061215-58]
OrganismDanio rerio (zebrafish)
Synonym(s)4f2, 4f2hc, 4t2hc, cd98, cd98hc, mdu1, nacae

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.75
  • 90.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.48e3
  • 3.48e3
  • 1.27e4
88.35
  • 88.35
  • 57.44
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
  • 1.07e4
85.92
  • 85.92
  • 64.24
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
5.01e3
  • 5.01e3
  • 1.07e4
  • 1.50e4
  • 1.51e4
  • 1.59e4
  • 1.60e4
83.24
  • 83.24
  • 64.14
  • 49.82
  • 49.30
  • 46.85
  • 46.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.02e3
  • 5.02e3
  • 7.50e3
  • 8.40e3
83.18
  • 83.18
  • 74.90
  • 71.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.23
  • 81.23
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.38
  • 80.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.24
  • 73.24
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
72.85
  • 72.85
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
1.00e4
  • 1.00e4
  • 1.05e4
  • 1.11e4
  • 1.32e4
  • 1.78e4
  • 1.79e4
66.40
  • 66.40
  • 64.85
  • 62.74
  • 55.84
  • 40.56
  • 40.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.25
  • 55.25
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.40e4
  • 1.40e4
52.98
  • 52.98
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.91
  • 49.91
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.46
  • 49.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.81
  • 48.81
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.90
  • 47.90
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.18
  • 43.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.72e4
  • 1.72e4
  • 1.75e4
42.29
  • 42.29
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
41.95
  • 41.95
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
38.97
  • 38.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.14
  • 36.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.91e4
  • 1.91e4
  • 1.94e4
36.00
  • 36.00
  • 35.00
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.98
  • 29.98
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.67
  • 26.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR318653
EnsemblENSDARG00000055791 (SLC3A2 (1 to many))
HGNCHGNC:11026 (SLC3A2 (1 to many))
Uniprot/SPTREMBLF1R3F0, F1R3F0_DANRE
ZFINZDB-GENE-061215-58 (zgc:158423)

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