D. rerio Gene: cnpy4 - ENSDARG00000055797 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055797
Namecnpy4
Descriptioncanopy4 [Source:ZFIN;Acc:ZDB-GENE-060315-5]
OrganismDanio rerio (zebrafish)
Synonym(s)prat4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.75e3
  • 1.75e3
  • 3.15e3
  • 4.29e3
  • 5.76e3
  • 6.17e3
  • 6.82e3
94.16
  • 94.16
  • 89.45
  • 85.63
  • 80.72
  • 79.34
  • 77.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
2.20e3
  • 2.20e3
  • 3.61e3
  • 6.02e3
  • 6.09e3
  • 6.86e3
92.63
  • 92.63
  • 87.92
  • 79.84
  • 79.62
  • 77.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
91.99
  • 91.99
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.11
  • 89.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.39e3
  • 4.39e3
  • 4.74e3
  • 4.77e3
  • 7.41e3
  • 8.31e3
  • 8.54e3
  • 9.09e3
  • 9.57e3
  • 1.01e4
  • 1.34e4
85.30
  • 85.30
  • 84.12
  • 84.03
  • 75.21
  • 72.18
  • 71.39
  • 69.56
  • 67.97
  • 66.03
  • 55.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:00072368 cell stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
4.50e3
  • 4.50e3
  • 6.21e3
  • 6.79e3
  • 7.51e3
  • 8.20e3
  • 8.20e3
  • 8.82e3
  • 1.02e4
  • 1.06e4
  • 1.17e4
  • 1.30e4
  • 1.32e4
  • 1.32e4
  • 1.34e4
  • 1.50e4
  • 1.51e4
  • 1.53e4
84.92
  • 84.92
  • 79.21
  • 77.27
  • 74.86
  • 72.55
  • 72.54
  • 70.46
  • 65.86
  • 64.49
  • 60.97
  • 56.55
  • 55.87
  • 55.81
  • 55.17
  • 49.81
  • 49.39
  • 48.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
  • 6.74e3
83.62
  • 83.62
  • 77.42
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.21e3
  • 5.21e3
82.56
  • 82.56
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.74
  • 80.74
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.84e3
  • 5.84e3
80.44
  • 80.44
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.10e3
  • 6.10e3
79.57
  • 79.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.23
  • 79.23
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.37
  • 74.37
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.79e3
  • 7.79e3
73.91
  • 73.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.43
  • 73.43
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.68e3
  • 8.68e3
70.94
  • 70.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.88
  • 68.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.59e3
  • 9.59e3
67.88
  • 67.88
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.22e4
65.93
  • 65.93
  • 59.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.77
  • 64.77
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.06e4
  • 1.06e4
  • 1.19e4
  • 1.43e4
64.35
  • 64.35
  • 60.15
  • 51.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.44e4
62.92
  • 62.92
  • 51.82
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
  • 1.48e4
61.50
  • 61.50
  • 50.46
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.06
  • 61.06
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.23
  • 58.23
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.55e4
57.12
  • 57.12
  • 48.23
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.56
  • 54.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAB201386, BC121734, BC152092, BC165037, CR376787
EnsemblENSDARG00000055797 (cnpy4)
Uniprot/SPTREMBLB2GR90, B2GR90_DANRE
Uniprot/SWISSPROTCNPY4_DANRE, Q2L6K8
ZFINZDB-GENE-060315-5 (cnpy4)

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