D. rerio Gene: kcnc3a - ENSDARG00000055855 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055855
Namekcnc3a
Descriptionpotassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
OrganismDanio rerio (zebrafish)
Synonym(s)kv3.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.03e3
  • 4.03e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
  • 1.49e4
86.25
  • 86.25
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
8.85e3
  • 8.85e3
  • 9.65e3
  • 1.50e4
  • 1.87e4
  • 2.10e4
70.36
  • 70.36
  • 67.70
  • 49.62
  • 37.42
  • 29.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.36e4
  • 1.36e4
  • 1.66e4
54.33
  • 54.33
  • 44.42
AEIR
  • AEIR
  • AEIR
CL:0000121Purkinje cell
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000038Larval:Day 6
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.21
  • 36.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.46
  • 26.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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