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D. rerio Gene: zc3h7b - ENSDARG00000055930 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055930
Namezc3h7b
Descriptionzinc finger CCCH-type containing 7B [Source:ZFIN;Acc:ZDB-GENE-080208-7]
OrganismDanio rerio (zebrafish)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.12e3
  • 2.12e3
  • 2.67e3
92.92
  • 92.92
  • 91.06
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
2.13e3
  • 2.13e3
  • 3.59e3
  • 3.75e3
  • 3.89e3
  • 5.94e3
92.89
  • 92.89
  • 88.00
  • 87.46
  • 86.97
  • 80.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.73e3
  • 2.73e3
90.85
  • 90.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.32e3
  • 3.32e3
  • 3.35e3
88.88
  • 88.88
  • 88.80
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.65e3
  • 3.65e3
  • 6.10e3
87.78
  • 87.78
  • 79.57
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.78e3
  • 3.78e3
87.34
  • 87.34
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.04e3
  • 4.04e3
  • 1.12e4
86.47
  • 86.47
  • 62.38
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.68
  • 84.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.72e3
  • 4.72e3
  • 6.51e3
84.21
  • 84.21
  • 78.21
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.13
  • 82.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.42
  • 81.42
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.53
  • 80.53
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.52
  • 80.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.42
  • 78.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.48
  • 77.48
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.98e3
  • 7.98e3
73.28
  • 73.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.53
  • 67.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.89
  • 65.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000055930 (zc3h7b)
ZFINZDB-GENE-080208-7 (zc3h7b)
EMBLBX000473
Uniprot/SPTREMBLE7F4T4, E7F4T4_DANRE

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