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D. rerio Gene: lcp2a - ENSDARG00000055955 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055955
Namelcp2a
Descriptionlymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fj47a12, zgc:101809
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.27
  • 91.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.47
  • 83.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.59
  • 82.59
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.02
  • 79.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.70e3
  • 7.70e3
74.21
  • 74.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.75
  • 63.75
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.29
  • 61.29
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.53
  • 60.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.19e4
  • 1.19e4
  • 1.53e4
60.00
  • 60.00
  • 48.69
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.45
  • 59.45
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.81
  • 52.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.13
  • 51.13
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.50e4
  • 1.50e4
  • 1.66e4
  • 1.79e4
  • 1.83e4
  • 1.83e4
49.92
  • 49.92
  • 44.39
  • 40.18
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.85
  • 47.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.75e4
  • 1.75e4
41.50
  • 41.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.81e4
  • 1.81e4
  • 1.83e4
  • 1.88e4
39.36
  • 39.36
  • 38.61
  • 36.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
38.92
  • 38.92
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.96e4
  • 1.96e4
  • 1.97e4
  • 2.09e4
  • 2.32e4
34.49
  • 34.49
  • 34.07
  • 29.90
  • 22.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.36
  • 34.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

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