D. rerio Gene: tmem161b - ENSDARG00000055989 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055989
Nametmem161b
Descriptiontransmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
OrganismDanio rerio (zebrafish)
Synonym(s)id:ibd2207, wu:fc31d04, zgc:63626

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.22
  • 94.22
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.99e3
  • 1.99e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
2.52e3
  • 2.52e3
  • 6.22e3
  • 7.45e3
  • 7.70e3
  • 7.80e3
  • 7.82e3
  • 7.84e3
  • 8.12e3
  • 8.18e3
  • 8.18e3
  • 8.21e3
  • 8.22e3
  • 8.78e3
  • 9.02e3
  • 1.05e4
  • 1.08e4
  • 1.50e4
  • 1.50e4
91.56
  • 91.56
  • 79.16
  • 75.05
  • 74.21
  • 73.88
  • 73.81
  • 73.77
  • 72.81
  • 72.62
  • 72.60
  • 72.50
  • 72.48
  • 70.59
  • 69.79
  • 64.69
  • 63.93
  • 49.81
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.48e3
  • 3.48e3
88.34
  • 88.34
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.20e3
  • 5.20e3
  • 8.01e3
  • 8.25e3
  • 8.58e3
82.60
  • 82.60
  • 73.18
  • 72.38
  • 71.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.79e3
  • 5.79e3
  • 5.87e3
  • 6.06e3
  • 1.05e4
  • 1.08e4
80.62
  • 80.62
  • 80.33
  • 79.71
  • 64.71
  • 63.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.67e3
  • 6.67e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.20e3
  • 7.20e3
  • 8.06e3
  • 8.31e3
  • 8.89e3
  • 8.98e3
  • 9.14e3
  • 9.77e3
  • 9.86e3
  • 1.15e4
  • 1.17e4
75.89
  • 75.89
  • 73.02
  • 72.19
  • 70.23
  • 69.93
  • 69.40
  • 67.30
  • 67.00
  • 61.43
  • 60.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.20e4
  • 1.25e4
  • 1.26e4
74.99
  • 74.99
  • 59.98
  • 58.31
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.66e3
  • 7.66e3
74.34
  • 74.34
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
8.06e3
  • 8.06e3
  • 8.44e3
  • 9.19e3
  • 9.26e3
  • 1.14e4
  • 1.22e4
73.03
  • 73.03
  • 71.74
  • 69.22
  • 69.01
  • 61.73
  • 59.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.09e3
  • 8.09e3
72.90
  • 72.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.27e3
  • 8.27e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.38e3
  • 8.38e3
  • 1.03e4
71.93
  • 71.93
  • 65.38
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.40e3
  • 8.40e3
  • 9.03e3
71.88
  • 71.88
  • 69.76
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.72e3
  • 8.72e3
  • 9.12e3
  • 1.08e4
70.81
  • 70.81
  • 69.46
  • 63.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.73e3
  • 8.73e3
70.77
  • 70.77
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
69.24
  • 69.24
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
  • 1.12e4
  • 1.19e4
69.13
  • 69.13
  • 62.50
  • 60.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.88
  • 65.88
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.31
  • 64.31
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.16e4
64.18
  • 64.18
  • 61.26
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.56
  • 63.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.44
  • 60.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.14
  • 60.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.42
  • 59.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.03
  • 58.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.99
  • 55.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC055170, BX470189, CR405703
EnsemblENSDARG00000055989 (tmem161b)
Uniprot/SWISSPROTQ7SY10, T161B_DANRE
ZFINZDB-GENE-040426-2693 (tmem161b)

Do not show this banner again