D. rerio Gene: sprn - ENSDARG00000056004 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056004
Namesprn
Descriptionshadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
OrganismDanio rerio (zebrafish)
Synonym(s)p12, q70yk5, shadoo, sho, sho1, sprna

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
  • 1.35e4
93.69
  • 93.69
  • 54.84
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.82e3
  • 3.82e3
  • 1.54e4
87.20
  • 87.20
  • 48.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
5.03e3
  • 5.03e3
  • 9.56e3
  • 1.52e4
  • 1.86e4
  • 1.91e4
  • 1.93e4
83.15
  • 83.15
  • 67.98
  • 49.08
  • 37.75
  • 36.08
  • 35.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.98e3
  • 8.98e3
  • 1.37e4
  • 1.40e4
69.94
  • 69.94
  • 54.24
  • 53.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.16e3
  • 9.16e3
  • 1.31e4
  • 1.33e4
  • 1.77e4
69.31
  • 69.31
  • 56.00
  • 55.42
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
1.02e4
  • 1.02e4
  • 1.50e4
  • 1.65e4
  • 1.71e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
  • 1.84e4
65.83
  • 65.83
  • 49.80
  • 44.63
  • 42.60
  • 40.56
  • 40.38
  • 40.18
  • 38.72
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
60.52
  • 60.52
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.65e4
  • 1.65e4
  • 1.67e4
  • 1.75e4
44.83
  • 44.83
  • 44.11
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.72e4
  • 1.72e4
42.37
  • 42.37
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.82e4
  • 1.82e4
  • 1.87e4
39.01
  • 39.01
  • 37.43
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.00
  • 37.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.72
  • 32.72
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.04
  • 31.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.62
  • 28.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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