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D. rerio Gene: dcst1 - ENSDARG00000056077 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056077
Namedcst1
DescriptionDC-STAMP domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070809-5]
OrganismDanio rerio (zebrafish)
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
934
  • 934
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.25
  • 52.25
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.51
  • 50.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.57e4
  • 1.57e4
  • 1.66e4
47.58
  • 47.58
  • 44.36
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
  • 1.68e4
47.51
  • 47.51
  • 43.78
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.26
  • 42.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.55
  • 31.55
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.24
  • 26.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.17
  • 24.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.31e4
  • 2.31e4
  • 2.32e4
  • 2.69e4
  • 2.77e4
22.59
  • 22.59
  • 22.24
  • 9.89
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species18 genesCompare expression
Bilateria21 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000056077.

Cross-references

EnsemblENSDARG00000056077 (dcst1)
ZFINZDB-GENE-070809-5 (dcst1)
EMBLCR388365
Uniprot/SPTREMBLF1R5G7, F1R5G7_DANRE, F8W407, F8W407_DANRE

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