D. rerio Gene: gtf2h5 - ENSDARG00000056099 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056099
Namegtf2h5
Descriptiongeneral transcription factor IIH, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041001-144]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-12h9.4, ttda, zgc:153434

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.25e3
  • 1.25e3
  • 2.37e3
  • 2.58e3
  • 2.79e3
  • 3.51e3
  • 4.00e3
95.83
  • 95.83
  • 92.08
  • 91.36
  • 90.68
  • 88.25
  • 86.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.48e3
  • 1.48e3
95.04
  • 95.04
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.54e3
  • 1.54e3
  • 1.56e3
  • 2.11e3
  • 3.62e3
  • 4.13e3
94.84
  • 94.84
  • 94.78
  • 92.95
  • 87.87
  • 86.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
  • 3.65e3
93.59
  • 93.59
  • 87.77
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.81
  • 92.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.38e3
  • 2.38e3
  • 3.76e3
  • 1.49e4
92.02
  • 92.02
  • 87.42
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.43
  • 90.43
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.89e3
  • 2.89e3
  • 3.12e3
  • 3.40e3
  • 3.48e3
  • 3.57e3
  • 3.84e3
  • 4.31e3
  • 4.33e3
  • 5.09e3
  • 9.12e3
90.33
  • 90.33
  • 89.54
  • 88.63
  • 88.34
  • 88.03
  • 87.16
  • 85.56
  • 85.49
  • 82.95
  • 69.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.00e3
  • 3.00e3
  • 3.94e3
89.96
  • 89.96
  • 86.81
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
  • 4.27e3
  • 4.84e3
  • 5.16e3
  • 5.51e3
  • 5.55e3
  • 5.56e3
  • 6.26e3
  • 6.35e3
  • 6.44e3
  • 7.30e3
  • 7.90e3
  • 8.55e3
  • 8.91e3
  • 1.49e4
  • 1.50e4
89.45
  • 89.45
  • 85.70
  • 83.80
  • 82.74
  • 81.56
  • 81.43
  • 81.38
  • 79.05
  • 78.73
  • 78.43
  • 75.57
  • 73.55
  • 71.36
  • 70.17
  • 50.20
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.20
  • 89.20
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.70e3
  • 3.70e3
87.60
  • 87.60
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.88e3
  • 3.88e3
  • 4.78e3
  • 6.50e3
87.00
  • 87.00
  • 84.01
  • 78.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.90
  • 86.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.10
  • 86.10
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
85.91
  • 85.91
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.73
  • 84.73
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.64e3
  • 4.64e3
84.46
  • 84.46
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
4.83e3
  • 4.83e3
  • 6.43e3
  • 7.03e3
  • 8.53e3
83.83
  • 83.83
  • 78.47
  • 76.47
  • 71.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.80
  • 83.80
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.39
  • 80.39
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.95e3
  • 5.95e3
80.06
  • 80.06
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.18e3
  • 6.18e3
  • 8.21e3
79.30
  • 79.30
  • 72.53
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.50e3
  • 6.50e3
78.24
  • 78.24
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.89e3
  • 6.89e3
76.91
  • 76.91
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.50e4
55.82
  • 55.82
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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