D. rerio Gene: gdi1 - ENSDARG00000056122 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056122
Namegdi1
DescriptionGDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110600
Orthologs(s)23 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
748
  • 748
  • 3.67e3
  • 1.49e4
97.50
  • 97.50
  • 87.70
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
  • 1.83e3
95.18
  • 95.18
  • 93.87
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
  • 1.72e3
  • 2.02e3
  • 3.38e3
  • 3.70e3
  • 3.83e3
  • 4.33e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.61e3
  • 8.96e3
  • 8.96e3
  • 9.34e3
  • 1.12e4
  • 1.12e4
  • 1.17e4
  • 1.23e4
  • 1.38e4
  • 1.45e4
  • 1.45e4
  • 1.47e4
94.79
  • 94.79
  • 94.24
  • 93.22
  • 88.69
  • 87.60
  • 87.17
  • 85.49
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 71.19
  • 69.99
  • 69.99
  • 68.71
  • 62.55
  • 62.51
  • 60.73
  • 58.86
  • 53.79
  • 51.56
  • 51.42
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.66e3
  • 1.66e3
  • 1.67e3
  • 2.62e3
  • 3.26e3
  • 3.63e3
  • 6.18e3
  • 6.31e3
  • 6.64e3
  • 9.54e3
  • 1.08e4
94.46
  • 94.46
  • 94.40
  • 91.22
  • 89.09
  • 87.86
  • 79.30
  • 78.87
  • 77.78
  • 68.07
  • 63.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.01e3
  • 2.01e3
  • 2.07e3
  • 2.84e3
93.28
  • 93.28
  • 93.06
  • 90.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
  • 4.65e3
  • 8.52e3
  • 1.25e4
92.50
  • 92.50
  • 84.43
  • 71.46
  • 58.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.23
  • 90.23
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.53e3
  • 3.53e3
88.20
  • 88.20
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.86e3
  • 6.86e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.43
  • 72.43
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
70.99
  • 70.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.80e3
  • 8.80e3
70.54
  • 70.54
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
  • 9.76e3
69.38
  • 69.38
  • 67.33
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
9.21e3
  • 9.21e3
  • 1.25e4
  • 1.26e4
  • 1.39e4
  • 1.60e4
  • 1.65e4
69.15
  • 69.15
  • 58.03
  • 57.85
  • 53.58
  • 46.39
  • 44.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
  • 1.07e4
67.15
  • 67.15
  • 64.05
AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
64.75
  • 64.75
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.70
  • 64.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.91
  • 63.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.32
  • 63.32
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.62
  • 59.62
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.24
  • 53.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.73
  • 49.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000056122.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000056122.

Cross-references

EnsemblENSDARG00000056122 (gdi1)
ZFINZDB-GENE-050522-504 (gdi1)
EMBLAL845287
Uniprot/SPTREMBLA2AR68, A2AR68_DANRE

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