D. rerio Gene: myct1a - ENSDARG00000056125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056125
Namemyct1a
Descriptionmyc target 1a [Source:ZFIN;Acc:ZDB-GENE-041001-143]
OrganismDanio rerio (zebrafish)
Synonym(s)myct1, si:dkey-12h9.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
  • 5.53e3
92.12
  • 92.12
  • 81.48
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.46e3
  • 3.46e3
88.42
  • 88.42
AEIR
  • AEIR
UBERON:2000164ventral mesenchyme
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.48e3
  • 4.48e3
  • 4.48e3
  • 4.48e3
85.00
  • 85.00
  • 85.00
  • 85.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
4.98e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
83.33
  • 83.33
  • 83.33
  • 83.33
  • 83.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.71
  • 67.71
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.87
  • 66.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.76
  • 65.76
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.69
  • 64.69
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.21e4
  • 1.21e4
  • 1.35e4
59.46
  • 59.46
  • 54.81
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.87
  • 58.87
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.58
  • 58.58
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.24e4
  • 1.24e4
  • 1.35e4
  • 1.39e4
  • 1.47e4
  • 1.64e4
58.53
  • 58.53
  • 54.83
  • 53.42
  • 50.83
  • 45.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
  • 1.71e4
56.12
  • 56.12
  • 42.90
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.85
  • 50.85
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.79
  • 47.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.30
  • 43.30
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.73
  • 41.73
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.98
  • 38.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.83
  • 35.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL954831
EnsemblENSDARG00000056125 (myct1a)
Uniprot/SWISSPROTMYCT1_DANRE, Q5SNQ9
ZFINZDB-GENE-041001-143 (myct1a)

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