D. rerio Gene: si:ch211-168k14.2 - ENSDARG00000056191 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056191
Namesi:ch211-168k14.2
Descriptionsi:ch211-168k14.2 [Source:ZFIN;Acc:ZDB-GENE-070912-149]
OrganismDanio rerio (zebrafish)
Orthologs(s)7 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.86e3
  • 7.86e3
73.68
  • 73.68
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.88
  • 72.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.47e4
  • 1.47e4
50.62
  • 50.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.59e4
  • 1.59e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.53
  • 46.53
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.63e4
  • 1.63e4
45.56
  • 45.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.74
  • 43.74
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.31
  • 43.31
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.53
  • 42.53
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.80e4
  • 1.80e4
  • 2.06e4
  • 2.09e4
  • 2.17e4
  • 2.27e4
39.58
  • 39.58
  • 31.12
  • 29.91
  • 27.48
  • 24.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
  • 1.86e4
39.16
  • 39.16
  • 37.69
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.93e4
  • 1.93e4
  • 1.93e4
35.36
  • 35.36
  • 35.31
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.93e4
  • 1.93e4
  • 2.22e4
35.26
  • 35.26
  • 25.58
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.09
  • 35.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.61
  • 34.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.08
  • 29.08
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.06
  • 25.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria7 species7 genesCompare expression

Orthology information comes from OMA : ENSDARG00000056191.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000056191.

Cross-references

EnsemblENSDARG00000056191 (si:ch211-168k14.2)
ZFINZDB-GENE-070912-149 (si:ch211-168k14.2)
Uniprot/SPTREMBLF1QJ42, F1QJ42_DANRE, F1QQX0, F1QQX0_DANRE, F1RE58, F1RE58_DANRE

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