D. rerio Gene: gnrh3 - ENSDARG00000056214 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056214
Namegnrh3
Descriptiongonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
OrganismDanio rerio (zebrafish)
Synonym(s)sgnrh

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
  • 1.11e4
78.17
  • 78.17
  • 62.79
AEIR
  • AEIR
  • AEIR
UBERON:0002924terminal nerve
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000041Larval:Days 21-29
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.50e3
  • 7.50e3
  • 1.28e4
  • 1.32e4
74.88
  • 74.88
  • 57.03
  • 55.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
8.39e3
  • 8.39e3
  • 9.55e3
  • 1.39e4
  • 1.75e4
  • 1.94e4
  • 2.77e4
71.91
  • 71.91
  • 68.03
  • 53.49
  • 41.25
  • 35.08
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.86e3
  • 8.86e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 8.96e3
  • 1.08e4
69.99
  • 69.99
  • 69.99
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000038Larval:Day 6
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000037Larval:Day 5
9.33e3
  • 9.33e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
68.74
  • 68.74
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.31e4
  • 1.33e4
64.28
  • 64.28
  • 56.22
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
  • 1.36e4
  • 1.41e4
57.46
  • 57.46
  • 54.53
  • 52.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000037Larval:Day 5
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
1.39e4
  • 1.39e4
  • 1.49e4
53.55
  • 53.55
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
1.40e4
  • 1.40e4
  • 1.40e4
  • 1.41e4
  • 1.41e4
  • 1.45e4
  • 1.46e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
  • 1.54e4
53.27
  • 53.27
  • 53.14
  • 52.78
  • 52.66
  • 51.52
  • 50.96
  • 50.00
  • 49.75
  • 49.68
  • 48.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001928preoptic area
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0005725olfactory system
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.52
  • 45.52
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
42.22
  • 42.22
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.79e4
  • 1.79e4
39.98
  • 39.98
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.11
  • 34.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.30
  • 33.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX005375
EnsemblENSDARG00000056214 (gnrh3)
Uniprot/SPTREMBLF1QW13, F1QW13_DANRE
ZFINZDB-GENE-030724-4 (gnrh3)

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