D. rerio Gene: bricd5 - ENSDARG00000056247 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056247
Namebricd5
DescriptionBRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
OrganismDanio rerio (zebrafish)
Synonym(s)hg21b, im:7138263

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000465material anatomical entity
  • ZFS:0000037Larval:Day 5
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.06e4
  • 1.06e4
  • 1.21e4
64.65
  • 64.65
  • 59.43
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.15e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.28e4
62.48
  • 62.48
  • 61.63
  • 61.34
  • 60.84
  • 60.50
  • 59.98
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
  • 1.26e4
  • 1.27e4
  • 1.54e4
  • 1.79e4
61.34
  • 61.34
  • 57.80
  • 57.39
  • 48.50
  • 40.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.49
  • 58.49
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
  • 1.70e4
51.82
  • 51.82
  • 43.12
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.33
  • 43.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.63
  • 20.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCT009714
EnsemblENSDARG00000056247 (bricd5)
Uniprot/SPTREMBLF1R3F8, F1R3F8_DANRE
ZFINZDB-GENE-050208-85 (bricd5)

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