D. rerio Gene: si:dkey-183i3.5 - ENSDARG00000056248 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056248
Namesi:dkey-183i3.5
Descriptionsi:dkey-183i3.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8568]
OrganismDanio rerio (zebrafish)
Synonym(s)fb15e04, krtt2c21, thread keratin alpha, wu:fb15e04

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
281
  • 281
  • 690
  • 6.46e3
  • 7.04e3
  • 1.56e4
  • 1.98e4
99.06
  • 99.06
  • 97.69
  • 78.37
  • 76.42
  • 47.65
  • 33.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
288
  • 288
  • 8.46e3
99.04
  • 99.04
  • 71.68
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
320
  • 320
  • 507
  • 1.07e3
98.93
  • 98.93
  • 98.31
  • 96.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
412
  • 412
  • 547
98.62
  • 98.62
  • 98.17
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
479
  • 479
  • 516
  • 931
  • 1.25e3
  • 4.32e3
  • 1.29e4
  • 1.38e4
  • 1.49e4
  • 1.57e4
  • 1.59e4
98.40
  • 98.40
  • 98.27
  • 96.89
  • 95.81
  • 85.54
  • 56.79
  • 53.74
  • 50.20
  • 47.36
  • 46.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.51
  • 92.51
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.85
  • 83.85
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.77
  • 78.77
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
  • 1.21e4
  • 1.61e4
73.43
  • 73.43
  • 59.59
  • 46.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
  • 1.71e4
66.48
  • 66.48
  • 42.78
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
  • 1.34e4
55.21
  • 55.21
  • 55.16
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.39
  • 47.39
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.84e4
  • 1.84e4
38.46
  • 38.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.33
  • 35.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000056248 (si:dkey-183i3.5)
Uniprot/SPTREMBLF1QEW2, F1QEW2_DANRE
ZFINZDB-GENE-030131-8568 (si:dkey-183i3.5)

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