D. rerio Gene: atxn7l2b - ENSDARG00000056268 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056268
Nameatxn7l2b
Descriptionataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
OrganismDanio rerio (zebrafish)
Synonym(s)atxn7l2, wu:fi36e12, zgc:92454

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
2.17e3
  • 2.17e3
  • 2.53e3
  • 3.84e3
  • 4.50e3
  • 7.02e3
92.74
  • 92.74
  • 91.54
  • 87.14
  • 84.92
  • 76.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.60e3
  • 3.60e3
  • 1.50e4
87.94
  • 87.94
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.41
  • 84.41
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000037Larval:Day 5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
  • 6.11e3
  • 6.28e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.67e3
  • 7.91e3
  • 8.82e3
  • 8.96e3
  • 8.96e3
  • 9.56e3
  • 9.58e3
  • 9.94e3
  • 9.99e3
  • 1.01e4
  • 1.02e4
  • 1.02e4
  • 1.03e4
  • 1.05e4
  • 1.07e4
  • 1.43e4
  • 1.44e4
83.33
  • 83.33
  • 79.55
  • 78.98
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.33
  • 73.52
  • 70.47
  • 69.99
  • 69.99
  • 67.99
  • 67.92
  • 66.73
  • 66.57
  • 66.34
  • 65.85
  • 65.83
  • 65.38
  • 64.76
  • 64.24
  • 51.99
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.78e3
  • 5.78e3
80.64
  • 80.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.27e3
  • 6.27e3
  • 7.39e3
  • 8.45e3
  • 9.34e3
  • 1.03e4
  • 1.10e4
79.01
  • 79.01
  • 75.25
  • 71.70
  • 68.73
  • 65.48
  • 63.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
  • 1.44e4
76.13
  • 76.13
  • 51.88
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.78e3
  • 7.78e3
  • 8.34e3
  • 8.44e3
  • 8.61e3
73.95
  • 73.95
  • 72.07
  • 71.73
  • 71.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.90e3
  • 7.90e3
73.54
  • 73.54
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.00e3
  • 8.00e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
  • 1.23e4
72.93
  • 72.93
  • 58.68
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.81
  • 72.81
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.12
  • 72.12
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.48e3
  • 8.48e3
71.61
  • 71.61
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
  • 9.15e3
71.32
  • 71.32
  • 69.36
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.93
  • 68.93
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.48e3
  • 9.48e3
68.27
  • 68.27
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.90e3
  • 9.90e3
  • 1.08e4
  • 1.11e4
66.85
  • 66.85
  • 63.86
  • 62.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.90e3
  • 9.90e3
  • 1.13e4
66.84
  • 66.84
  • 62.29
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.93e3
  • 9.93e3
66.76
  • 66.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.37
  • 66.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
1.06e4
  • 1.06e4
  • 1.10e4
  • 1.17e4
  • 1.18e4
  • 1.21e4
  • 1.22e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
  • 1.29e4
64.49
  • 64.49
  • 63.15
  • 60.89
  • 60.46
  • 59.58
  • 59.17
  • 58.12
  • 58.10
  • 57.32
  • 56.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.08e4
  • 1.08e4
63.93
  • 63.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.65
  • 63.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.64
  • 58.64
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.30
  • 58.30
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.25
  • 57.25
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.91
  • 55.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.22
  • 48.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX470135
EnsemblENSDARG00000056268 (atxn7l2b)
Uniprot/SPTREMBLA5PMH0, A5PMH0_DANRE
ZFINZDB-GENE-040718-403 (atxn7l2b)

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