D. rerio Gene: SBK1 - ENSDARG00000056294 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056294
NameSBK1
Descriptionsi:ch211-183d21.3 [Source:ZFIN;Acc:ZDB-GENE-091118-114]
OrganismDanio rerio (zebrafish)
Synonym(s)sbk
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.68e3
  • 6.68e3
77.62
  • 77.62
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
9.35e3
  • 9.35e3
  • 9.96e3
  • 1.54e4
  • 1.79e4
  • 1.80e4
68.68
  • 68.68
  • 66.67
  • 48.44
  • 40.06
  • 39.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.30e4
65.42
  • 65.42
  • 56.41
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.05e4
  • 1.05e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.19e4
  • 1.19e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.24e4
  • 1.24e4
  • 1.47e4
58.33
  • 58.33
  • 50.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.05
  • 49.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.65e4
  • 1.65e4
44.86
  • 44.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.81
  • 40.81
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.22
  • 22.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.82
  • 20.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000056294.

Cross-references

EnsemblENSDARG00000056294 (SBK1)
HGNCHGNC:17699 (SBK1)
ZFINZDB-GENE-091118-114 (si:ch211-183d21.3)
EMBLCU469584
Uniprot/SPTREMBLE7F802, E7F802_DANRE, E9QI42, E9QI42_DANRE

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