D. rerio Gene: rhot2 - ENSDARG00000056328 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056328
Namerhot2
Descriptionras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:123249

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.05e3
  • 4.05e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.80e3
  • 4.80e3
  • 6.24e3
  • 1.07e4
  • 1.07e4
  • 1.09e4
83.94
  • 83.94
  • 79.12
  • 64.27
  • 64.03
  • 63.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.15e3
  • 5.15e3
82.77
  • 82.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
5.64e3
  • 5.64e3
  • 7.80e3
  • 1.17e4
  • 1.18e4
81.12
  • 81.12
  • 73.88
  • 60.79
  • 60.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
6.34e3
  • 6.34e3
  • 6.89e3
  • 8.88e3
  • 1.19e4
  • 1.28e4
  • 1.29e4
  • 1.32e4
  • 1.34e4
  • 1.43e4
78.78
  • 78.78
  • 76.94
  • 70.28
  • 60.27
  • 57.13
  • 56.65
  • 55.80
  • 55.03
  • 52.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002531paired fin bud
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.13
  • 73.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.55e3
  • 9.55e3
68.01
  • 68.01
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.89e3
  • 9.89e3
  • 9.92e3
66.90
  • 66.90
  • 66.77
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.99
  • 65.99
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.98
  • 65.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.20
  • 64.20
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.03
  • 64.03
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
  • 1.23e4
  • 1.30e4
  • 1.31e4
  • 1.31e4
  • 1.34e4
  • 1.37e4
  • 1.40e4
  • 1.40e4
  • 1.44e4
  • 1.45e4
61.85
  • 61.85
  • 58.79
  • 56.34
  • 56.25
  • 55.99
  • 55.21
  • 53.98
  • 53.29
  • 53.04
  • 51.62
  • 51.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.73
  • 61.73
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.15e4
  • 1.15e4
  • 1.37e4
  • 1.53e4
61.57
  • 61.57
  • 54.20
  • 48.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.79
  • 60.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.94
  • 58.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
  • 1.25e4
58.89
  • 58.89
  • 58.04
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.26e4
  • 1.26e4
57.82
  • 57.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.85
  • 56.85
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.65
  • 56.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC109430
EnsemblENSDARG00000056328 (rhot2)
Uniprot/SWISSPROTMIRO2_DANRE, Q32LU1
ZFINZDB-GENE-051120-96 (rhot2)

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