D. rerio Gene: mhc2dbb - ENSDARG00000056330 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056330
Namemhc2dbb
Descriptionmajor histocompatibility complex class II DBB gene [Source:ZFIN;Acc:ZDB-GENE-010112-2]
OrganismDanio rerio (zebrafish)
Synonym(s)dbb, si:busm1-241h12.1, si:dz241h12.1, zgc:153067

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.21
  • 55.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.69
  • 48.69
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.99
  • 40.99
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.02e4
  • 2.02e4
  • 2.51e4
32.25
  • 32.25
  • 16.01
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.32
  • 26.32
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.22e4
  • 2.22e4
  • 2.42e4
  • 2.54e4
  • 2.77e4
25.64
  • 25.64
  • 18.97
  • 14.86
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX908800, CT573202
EnsemblENSDARG00000056330 (mhc2dbb)
Uniprot/SPTREMBLM9MMA1, M9MMA1_DANRE
ZFINZDB-GENE-010112-2 (mhc2dbb)

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