D. rerio Gene: CLEC17A (1 to many) - ENSDARG00000056379 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056379
NameCLEC17A (1 to many)
Descriptionsi:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
OrganismDanio rerio (zebrafish)
Synonym(s)ch211-154o6.6, flj45910, si:ch211-154o6.6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
678
  • 678
97.73
  • 97.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.03e3
  • 1.03e3
  • 1.03e4
96.57
  • 96.57
  • 65.63
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.18e3
  • 2.18e3
  • 4.26e3
92.69
  • 92.69
  • 85.75
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.65e3
  • 2.65e3
  • 7.57e3
91.13
  • 91.13
  • 74.67
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.83e3
  • 2.83e3
  • 2.99e3
  • 4.38e3
  • 5.35e3
  • 6.28e3
90.54
  • 90.54
  • 89.98
  • 85.35
  • 82.09
  • 78.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.21e3
  • 3.21e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.16
  • 88.16
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.00e3
  • 4.00e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.98
  • 82.98
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.78
  • 79.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.50
  • 79.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.30
  • 76.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.33
  • 75.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.23
  • 73.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.39e4
  • 1.39e4
53.52
  • 53.52
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.77
  • 50.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.66e4
  • 1.66e4
  • 1.73e4
44.40
  • 44.40
  • 42.23
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX294670, FP085428
EnsemblENSDARG00000056379 (CLEC17A (1 to many))
HGNCHGNC:34520 (CLEC17A (1 to many))
Uniprot/SPTREMBLQ1LXQ4, Q1LXQ4_DANRE
ZFINZDB-GENE-141216-19 (si:ch73-86n18.1)

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