Gene: CLEC17A (1 to many) - ENSDARG00000056379 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000056379
Name	CLEC17A (1 to many)
Description	si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
Organism	Danio rerio (zebrafish)
Synonym(s)	ch211-154o6.6, flj45910, si:ch211-154o6.6

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	678 678	97.73 97.73	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.03e3 1.03e3 1.03e4	96.57 96.57 65.63	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	2.18e3 2.18e3 4.26e3	92.69 92.69 85.75	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	2.58e3 2.58e3	91.37 91.37	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.59e3 2.59e3	91.34 91.34	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	2.65e3 2.65e3 7.57e3	91.13 91.13 74.67	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	2.83e3 2.83e3 2.99e3 4.38e3 5.35e3 6.28e3	90.54 90.54 89.98 85.35 82.09 78.97	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	3.21e3 3.21e3	89.25 89.25	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.54e3 3.54e3	88.16 88.16	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	3.97e3 3.97e3	86.73 86.73	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	4.00e3 4.00e3	86.61 86.61	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.09e3 5.09e3	82.98 82.98	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	6.04e3 6.04e3	79.78 79.78	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.12e3 6.12e3	79.50 79.50	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.08e3 7.08e3	76.30 76.30	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	7.37e3 7.37e3	75.33 75.33	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	8.00e3 8.00e3	73.23 73.23	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.81 64.81	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.11 54.11	AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000022Gastrula:Bud	1.39e4 1.39e4	53.52 53.52	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.77 50.77	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.63e4 1.63e4	45.38 45.38	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	1.66e4 1.66e4 1.73e4	44.40 44.40 42.23	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

EMBL	BX294670, FP085428
Ensembl	ENSDARG00000056379 (CLEC17A (1 to many))
HGNC	HGNC:34520 (CLEC17A (1 to many))
Uniprot/SPTREMBL	Q1LXQ4, Q1LXQ4_DANRE
ZFIN	ZDB-GENE-141216-19 (si:ch73-86n18.1)