D. rerio Gene: crp - ENSDARG00000056498 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056498
Namecrp
Descriptionc-reactive protein, pentraxin-related [Source:ZFIN;Acc:ZDB-GENE-060901-6]
OrganismDanio rerio (zebrafish)
Synonym(s)crp5, ptx, ptx5, zgc:152809
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
468
  • 468
  • 2.36e4
98.44
  • 98.44
  • 21.12
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
496
  • 496
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.76e3
  • 1.76e3
  • 1.97e4
  • 2.77e4
94.10
  • 94.10
  • 34.02
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.08e3
  • 5.08e3
83.01
  • 83.01
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
82.77
  • 82.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.73e3
  • 8.73e3
70.77
  • 70.77
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.51
  • 67.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.72
  • 62.72
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.97e4
60.41
  • 60.41
  • 33.94
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.17
  • 60.17
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.36e4
  • 1.36e4
  • 1.67e4
54.43
  • 54.43
  • 44.11
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.43e4
  • 1.43e4
  • 1.54e4
52.22
  • 52.22
  • 48.49
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.48e4
  • 1.48e4
50.59
  • 50.59
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.72e4
  • 1.72e4
42.53
  • 42.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.23
  • 38.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.33
  • 35.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.95
  • 33.95
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.49e4
  • 2.49e4
16.75
  • 16.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000056498.

Cross-references

EnsemblENSDARG00000056498 (crp)
ZFINZDB-GENE-060901-6 (crp)
EMBLBX001030
Uniprot/SPTREMBLA3KPH8, A3KPH8_DANRE

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