D. rerio Gene: bcar1 - ENSDARG00000056525 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056525
Namebcar1
Descriptionbreast cancer anti-estrogen resistance 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
OrganismDanio rerio (zebrafish)
Synonym(s)fc17f11, wu:fc17f11, zgc:175192
Orthologs(s)23 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.20e3
  • 2.20e3
  • 9.83e3
92.64
  • 92.64
  • 67.10
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.27e3
  • 4.27e3
  • 5.34e3
  • 5.49e3
  • 5.52e3
  • 5.64e3
  • 5.95e3
  • 6.34e3
  • 6.44e3
  • 6.49e3
  • 7.30e3
  • 8.01e3
  • 8.54e3
  • 8.71e3
  • 1.09e4
  • 1.47e4
  • 1.49e4
85.71
  • 85.71
  • 82.12
  • 81.63
  • 81.51
  • 81.13
  • 80.08
  • 78.78
  • 78.44
  • 78.28
  • 75.55
  • 73.17
  • 71.41
  • 70.83
  • 63.64
  • 50.90
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
5.56e3
  • 5.56e3
  • 5.69e3
  • 6.43e3
  • 6.76e3
  • 7.27e3
  • 7.42e3
  • 7.58e3
  • 8.17e3
  • 8.37e3
  • 9.73e3
81.39
  • 81.39
  • 80.94
  • 78.48
  • 77.36
  • 75.67
  • 75.17
  • 74.64
  • 72.65
  • 71.98
  • 67.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
  • 8.33e3
81.35
  • 81.35
  • 72.09
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.14
  • 79.14
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.52e3
  • 6.52e3
78.16
  • 78.16
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.52e3
  • 6.52e3
78.16
  • 78.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.20e3
  • 7.20e3
75.90
  • 75.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.62e3
  • 7.62e3
  • 1.00e4
74.49
  • 74.49
  • 66.45
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.68e3
  • 7.68e3
  • 7.91e3
  • 8.35e3
74.27
  • 74.27
  • 73.51
  • 72.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
7.79e3
  • 7.79e3
  • 9.51e3
  • 1.05e4
  • 1.09e4
  • 1.15e4
  • 1.25e4
73.93
  • 73.93
  • 68.15
  • 64.90
  • 63.43
  • 61.47
  • 58.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.98e3
  • 7.98e3
  • 9.20e3
  • 1.05e4
  • 1.22e4
73.28
  • 73.28
  • 69.21
  • 64.99
  • 59.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.69
  • 72.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.02
  • 72.02
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.00e3
  • 9.00e3
69.85
  • 69.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.82
  • 69.82
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.93e3
  • 9.93e3
66.75
  • 66.75
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.99
  • 65.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.82
  • 57.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.86
  • 53.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.71
  • 51.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.65
  • 50.65
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
38.93
  • 38.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.58
  • 36.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000056525.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000056525.

Cross-references

EnsemblENSDARG00000056525 (bcar1)
ZFINZDB-GENE-030131-2774 (bcar1)
EMBLBC168512, CR933017
Uniprot/SPTREMBLB5DE36, B5DE36_DANRE

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