D. rerio Gene: serinc2 - ENSDARG00000056532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056532
Nameserinc2
Descriptionserine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7151765, si:ch211-232d9.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
511
  • 511
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
566
  • 566
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
684
  • 684
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
844
  • 844
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
894
  • 894
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.12e3
  • 1.12e3
  • 1.80e3
  • 3.82e3
  • 4.08e3
  • 7.22e3
96.25
  • 96.25
  • 93.98
  • 87.22
  • 86.33
  • 75.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.15e3
  • 1.15e3
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.53e3
  • 1.53e3
  • 9.84e3
94.89
  • 94.89
  • 67.05
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.33
  • 94.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.54e3
  • 2.54e3
  • 3.98e3
91.49
  • 91.49
  • 86.67
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
2.60e3
  • 2.60e3
  • 5.00e3
  • 5.04e3
  • 6.90e3
  • 7.35e3
  • 1.05e4
91.29
  • 91.29
  • 83.25
  • 83.13
  • 76.90
  • 75.40
  • 64.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.83e3
  • 2.83e3
90.51
  • 90.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.38e3
  • 3.38e3
  • 1.47e4
88.68
  • 88.68
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.41e3
  • 3.41e3
  • 5.68e3
88.58
  • 88.58
  • 80.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.89e3
  • 3.89e3
  • 4.06e3
  • 4.85e3
  • 4.93e3
  • 6.25e3
  • 6.60e3
  • 7.37e3
  • 8.92e3
  • 9.06e3
  • 1.23e4
86.98
  • 86.98
  • 86.41
  • 83.77
  • 83.51
  • 79.08
  • 77.89
  • 75.34
  • 70.12
  • 69.66
  • 58.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
4.09e3
  • 4.09e3
  • 5.43e3
  • 6.65e3
  • 6.82e3
  • 7.29e3
  • 7.52e3
  • 7.91e3
  • 7.98e3
  • 8.03e3
  • 8.20e3
  • 8.21e3
  • 8.43e3
  • 8.55e3
  • 1.09e4
  • 1.32e4
  • 1.46e4
  • 1.49e4
86.30
  • 86.30
  • 81.82
  • 77.73
  • 77.18
  • 75.61
  • 74.81
  • 73.50
  • 73.27
  • 73.11
  • 72.54
  • 72.51
  • 71.78
  • 71.36
  • 63.60
  • 55.92
  • 51.01
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.24
  • 86.24
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.74e3
  • 4.74e3
  • 5.03e3
  • 7.06e3
84.13
  • 84.13
  • 83.16
  • 76.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.00e3
  • 7.00e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.36e3
  • 7.36e3
75.36
  • 75.36
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.92e3
  • 7.92e3
  • 8.31e3
  • 1.49e4
73.50
  • 73.50
  • 72.16
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.42
  • 73.42
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.82e3
  • 9.82e3
67.13
  • 67.13
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.08e4
  • 1.08e4
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.20e4
  • 1.20e4
  • 1.25e4
  • 1.26e4
62.48
  • 62.48
  • 62.48
  • 59.98
  • 59.98
  • 58.31
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.14e4
  • 1.21e4
  • 1.23e4
61.75
  • 61.75
  • 61.75
  • 59.36
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.16e4
  • 1.16e4
  • 1.21e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
61.09
  • 61.09
  • 59.36
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 56.65
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
59.97
  • 59.97
  • 54.97
  • 54.52
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.34e4
  • 1.34e4
  • 1.34e4
59.08
  • 59.08
  • 59.08
  • 58.32
  • 54.99
  • 54.99
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.34e4
  • 1.65e4
57.44
  • 57.44
  • 55.17
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.57
  • 52.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX322664
EnsemblENSDARG00000056532 (serinc2)
Uniprot/SPTREMBLI3IRX9, I3IRX9_DANRE, Q1LXL6, Q1LXL6_DANRE
ZFINZDB-GENE-041111-296 (serinc2)

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