D. rerio Gene: ndufs6 - ENSDARG00000056583 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056583
Namendufs6
DescriptionNADH dehydrogenase (ubiquinone) Fe-S protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103774

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
365
  • 365
98.78
  • 98.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
405
  • 405
98.65
  • 98.65
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
417
  • 417
  • 2.03e3
98.61
  • 98.61
  • 93.20
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
459
  • 459
98.47
  • 98.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
569
  • 569
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
575
  • 575
  • 682
  • 891
  • 1.03e3
  • 1.10e3
  • 1.17e3
  • 1.22e3
  • 1.54e3
  • 1.73e3
  • 2.08e3
98.08
  • 98.08
  • 97.72
  • 97.02
  • 96.54
  • 96.32
  • 96.10
  • 95.91
  • 94.86
  • 94.20
  • 93.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
582
  • 582
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
601
  • 601
97.99
  • 97.99
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
673
  • 673
  • 762
97.75
  • 97.75
  • 97.45
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
691
  • 691
  • 1.25e3
  • 1.49e4
97.69
  • 97.69
  • 95.83
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
694
  • 694
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
742
  • 742
  • 842
  • 1.06e3
97.52
  • 97.52
  • 97.19
  • 96.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
748
  • 748
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
774
  • 774
  • 810
  • 810
  • 939
  • 967
  • 987
  • 1.19e3
  • 1.36e3
  • 1.44e3
  • 1.46e3
  • 1.49e3
  • 1.56e3
  • 1.69e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.10e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.47e4
  • 1.49e4
97.41
  • 97.41
  • 97.29
  • 97.29
  • 96.86
  • 96.77
  • 96.70
  • 96.01
  • 95.44
  • 95.17
  • 95.12
  • 95.01
  • 94.79
  • 94.35
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 76.22
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 50.90
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
800
  • 800
97.32
  • 97.32
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
881
  • 881
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
922
  • 922
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
951
  • 951
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
959
  • 959
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
983
  • 983
  • 1.26e3
  • 1.27e3
  • 1.76e3
96.71
  • 96.71
  • 95.79
  • 95.76
  • 94.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
988
  • 988
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.27
  • 96.27
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.10
  • 96.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
96.00
  • 96.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.29e3
  • 1.29e3
  • 1.50e3
  • 1.95e3
  • 2.11e3
  • 2.83e3
  • 2.92e3
95.69
  • 95.69
  • 94.98
  • 93.49
  • 92.94
  • 90.53
  • 90.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
  • 1.97e3
93.81
  • 93.81
  • 93.39
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.95e3
  • 1.95e3
93.47
  • 93.47
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.97e3
  • 1.97e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.21e3
  • 3.21e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
4.11e3
  • 4.11e3
  • 5.36e3
  • 6.49e3
  • 7.68e3
  • 8.01e3
86.25
  • 86.25
  • 82.06
  • 78.25
  • 74.27
  • 73.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.06e3
  • 9.06e3
69.65
  • 69.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX571830
EnsemblENSDARG00000056583 (ndufs6)
Uniprot/SPTREMBLI3ISK7, I3ISK7_DANRE, Q1LWG2, Q1LWG2_DANRE
ZFINZDB-GENE-040912-86 (ndufs6)

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