D. rerio Gene: cybb - ENSDARG00000056615 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056615
Namecybb
Descriptioncytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
OrganismDanio rerio (zebrafish)
Synonym(s)gp91, zgc:64144

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
537
  • 537
98.21
  • 98.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.71
  • 95.71
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.73
  • 82.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.58
  • 71.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.70e3
  • 8.70e3
  • 1.39e4
70.85
  • 70.85
  • 53.53
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.85
  • 70.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.42
  • 70.42
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.00e3
  • 9.00e3
  • 1.63e4
69.86
  • 69.86
  • 45.33
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.36e3
  • 9.36e3
  • 1.07e4
68.65
  • 68.65
  • 64.33
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.29e4
  • 1.29e4
61.88
  • 61.88
  • 59.98
  • 56.65
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.82
  • 58.82
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.24e4
  • 1.24e4
  • 1.29e4
  • 1.37e4
58.33
  • 58.33
  • 56.65
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
  • 1.28e4
  • 1.31e4
57.13
  • 57.13
  • 57.13
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.30e4
  • 1.34e4
57.11
  • 57.11
  • 56.49
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
  • 1.34e4
  • 1.36e4
57.11
  • 57.11
  • 55.24
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.38e4
  • 1.49e4
56.65
  • 56.65
  • 53.83
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.32e4
  • 1.34e4
56.65
  • 56.65
  • 55.86
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.82
  • 50.82
AEIR
  • AEIR
CL:0000775neutrophil
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.51e4
  • 1.51e4
  • 1.54e4
  • 1.62e4
  • 1.70e4
  • 1.73e4
49.41
  • 49.41
  • 48.41
  • 45.87
  • 43.12
  • 42.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.55e4
  • 1.55e4
  • 1.72e4
48.14
  • 48.14
  • 42.31
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR450831
EnsemblENSDARG00000056615 (cybb)
Uniprot/SPTREMBLF1QV52, F1QV52_DANRE
ZFINZDB-GENE-040426-1380 (cybb)

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