D. rerio Gene: ptenb - ENSDARG00000056623 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056623
Nameptenb
Descriptionphosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
OrganismDanio rerio (zebrafish)
Synonym(s)fa11a08, fb73f10, fc83f12, fd16b10, fk90e11, pten, si:bz1g13.4, wu:fa11a08, wu:fb73f10, wu:fc83f12, wu:fd16b10, wu:fk90e11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
716
  • 716
  • 777
  • 1.95e3
  • 2.38e3
97.60
  • 97.60
  • 97.40
  • 93.49
  • 92.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
1.54e3
  • 1.54e3
  • 2.30e3
  • 2.93e3
  • 3.80e3
  • 4.29e3
  • 4.89e3
  • 5.20e3
  • 5.26e3
  • 5.93e3
  • 6.23e3
94.86
  • 94.86
  • 92.29
  • 90.20
  • 87.30
  • 85.64
  • 83.63
  • 82.58
  • 82.38
  • 80.13
  • 79.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.58e3
  • 1.58e3
  • 6.45e3
  • 8.06e3
  • 8.65e3
  • 8.92e3
94.72
  • 94.72
  • 78.40
  • 73.03
  • 71.04
  • 70.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
1.92e3
  • 1.92e3
  • 2.15e3
  • 2.35e3
  • 2.35e3
  • 2.42e3
  • 3.28e3
  • 3.73e3
  • 3.95e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.98e3
  • 4.98e3
  • 4.99e3
  • 5.24e3
  • 5.27e3
  • 5.44e3
  • 6.15e3
  • 6.22e3
  • 6.54e3
  • 6.54e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 6.97e3
  • 7.47e3
  • 7.47e3
  • 8.08e3
93.56
  • 93.56
  • 92.79
  • 92.13
  • 92.13
  • 91.91
  • 89.01
  • 87.52
  • 86.78
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 83.33
  • 83.33
  • 83.29
  • 82.46
  • 82.35
  • 81.79
  • 79.40
  • 79.18
  • 78.12
  • 78.10
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.66
  • 74.99
  • 74.99
  • 72.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.99e3
  • 1.99e3
  • 2.02e3
93.35
  • 93.35
  • 93.25
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.07e3
  • 2.07e3
  • 4.13e3
93.08
  • 93.08
  • 86.16
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
2.41e3
  • 2.41e3
  • 1.29e4
  • 1.31e4
  • 1.37e4
  • 1.39e4
91.93
  • 91.93
  • 56.79
  • 56.22
  • 54.13
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.78
  • 91.78
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.49e3
  • 2.49e3
  • 2.94e3
  • 3.43e3
91.65
  • 91.65
  • 90.17
  • 88.50
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
  • 4.80e3
87.60
  • 87.60
  • 83.92
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.29
  • 87.29
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.82e3
  • 3.82e3
87.20
  • 87.20
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.83e3
  • 3.83e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.24e3
  • 4.24e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
85.68
  • 85.68
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
85.06
  • 85.06
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.42
  • 84.42
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.87e3
  • 4.87e3
83.69
  • 83.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
4.92e3
  • 4.92e3
  • 6.82e3
  • 6.92e3
  • 7.31e3
  • 7.46e3
  • 7.68e3
83.53
  • 83.53
  • 77.17
  • 76.84
  • 75.52
  • 75.01
  • 74.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.43
  • 81.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.22
  • 81.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.70
  • 77.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.02
  • 74.02
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
  • 1.25e4
66.67
  • 66.67
  • 58.31
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.21e4
  • 1.21e4
  • 1.24e4
59.36
  • 59.36
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
  • 1.40e4
58.33
  • 58.33
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:0005068neural rod
  • ZFS:0000026Segmentation:14-19 somites
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.31e4
  • 1.31e4
  • 1.37e4
56.23
  • 56.23
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000026Segmentation:14-19 somites
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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