D. rerio Gene: gfra4a - ENSDARG00000056651 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056651
Namegfra4a
DescriptionGDNF family receptor alpha 4a [Source:ZFIN;Acc:ZDB-GENE-080402-10]
OrganismDanio rerio (zebrafish)
Synonym(s)gfra4, zgc:171814
Orthologs(s)3 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.55
  • 79.55
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
  • 1.54e4
68.78
  • 68.78
  • 48.52
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.71
  • 59.71
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.44e4
  • 1.44e4
  • 1.59e4
51.64
  • 51.64
  • 46.74
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
  • 1.94e4
  • 2.04e4
  • 2.05e4
  • 2.15e4
51.35
  • 51.35
  • 34.91
  • 31.61
  • 31.42
  • 28.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.50e4
  • 1.50e4
  • 2.12e4
49.64
  • 49.64
  • 28.93
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.54e4
  • 1.54e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.59e4
  • 1.59e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.28
  • 43.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.22
  • 40.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.63
  • 36.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.69
  • 28.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000056651.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Vertebrata5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000056651.

Cross-references

EnsemblENSDARG00000056651 (gfra4a)
ZFINZDB-GENE-080402-10 (gfra4a)
EMBLAL928929, BX088726, CR589874
Uniprot/SPTREMBLB8A4G7, B8A4G7_DANRE, F1Q631, F1Q631_DANRE

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